Archana Malhotra
Computational Biologist
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SRF post in NEHU, Shillong
Dept of Biochemistry North-Eastern Hill University (A University with Potential for Excellence) Umshing, Shillong- 793 022 Applications are invited for the post of Senior Research Fellow- SRF (1) and Junior Research Fellow- JRF (1) to be...ClinCNV: Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data
By Neel 1822 days agogithub.com - ClinCNV detects CNVs in germline and somatic context in NGS data (targeted and whole-genome). We work in cohorts, so it makes sense to try ClinCNV if you have more than 10 samples (recommended amount - 40 since we estimate variances from...
Reverse Complement Problem Solved with Perl
Last updated 3504 days ago by JitQuestion at http://rosalind.info/problems/1b/ #Find the reverse complement of a DNA string.#Given: A DNA string Pattern.#Return: Pattern, the reverse complement of Pattern.use strict;use warnings;my $string="AAAACCCGGT";my $finalString="";my %hash...LoFreq*: A sequence-quality aware, ultra-sensitive variant caller for NGS data
By BioStar 1790 days agocsb5.github.io - LoFreq* (i.e. LoFreq version 2) is a fast and sensitive variant-caller for inferring SNVs and indels from next-generation sequencing data. It makes full use of base-call qualities and other sources of errors inherent in sequencing (e.g. mapping or...Appointment of two traineeships and two studentships in Bioinformatics
Jawaharlal Nehru TROPICAL BOTANIC GARDEN AND RESEARCH INSTITUTE An organization under the Kerala State Council for Science, Technology and Environment and National Centre of Excellence, Government of India Applications are invited for the...FiNGS: Filters for Next Generation Sequencing
By Neel 1415 days agogithub.com - Key features Filters SNVs from any variant caller to remove false positives Calculates metrics based on BAM files and provides filtering not possible with other tools Fully user-configurable filtering (including which filters to use and their...Research Associate at International Centre for Genetic Engineering and Biotechnology (ICGEB)
Research Associate International Centre for Genetic Engineering and Biotechnology (ICGEB) Address: Aruna Asaf Ali Marg, Jawaharlal Nehru University, New Delhi Postal Code: 110067 City: New Delhi State: Delhi Qualifications: Experience in many...-
Libraries or management tools for high throughput sequencing data
Last updated 100 days ago by LEGEGATB Library. The Genome Analysis Toolbox with de-Bruijn graph. A large part of tools developed by the GenScale team are based on this library.These methods enable the analysis of data sets of any size on multi-core desktop... Research Associate Bioinformatics job position in Indian Agricultural Statistics Research Institute...
Research Associate Statistics Eligibility : M Phil / Phd, MSc Location : Delhi Last Date : 27 Jun 2015 Hiring Process : Walk - In Indian Agricultural Statistics Research Institute (IASRI) - Job DetailsDate of posting:03 Jun...Qualimap2: Evaluating next generation sequencing alignment data
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