Positions Open For Temporary Research Project Posts for CSIR Project, Delhi
CSIR is looking for bright young candidates to get involved in building algorithms and platforms for large biological data analyses in the areas of comparative genomics,...
FYI, I've found it useful to use MUMmer to extract the specific changes that Racon makes, so I can evaluate them individually:
minimap -t 24 assembly.fasta long_reads.fastq.gz | racon -t 24 long_reads.fastq.gz - assembly.fasta...
www.cybertory.org - Abstract
This project presents demonstrations of selected computer science algorithms important in bioinformatics, implemented in the spreadsheet program Microsoft Excel. Spreadsheets provide an interesting platform for demonstration of...
chmille4.github.io - Scribl is a javascript, Canvas-based graphics library that easily generates biological visuals of genomic regions, alignments, and assembly data. Scribl can also be used in conventional offline pipelines, since everything needed to generate charts...
github.com - ASCIIGenome is a genome browser based on command line interface and designed for running from console terminals.
Since ASCIIGenome does not require a graphical interface it is particularly useful for quickly visualizing genomic data...
The Huber group develops computational and statistical methods to design and analyse novel experimental approaches in genetics and cell biology.
Future projects and goals
Large-scale systematic maps of gene-gene and gene-environment...
genoplotr.r-forge.r-project.org - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files.
Features
Linear...
JAIPUR NATIONAL UNIVERSITY, SCHOOL OF LIFE SCIENCES (SIILAS CAMPUS) URGENTLY REQUIRES
Asst. PROF IN BIOINFORMATICS.
QUALIFICATION: AS PER UGC
DESIRABLE: 1 YEAR EXPERIENCE IN ACADEMICS
CONTACT immediately
Prof...
github.com - LTR_Finder is an efficient program for finding full-length LTR retrotranspsons in genome sequences.
The Program first constructs all exact match pairs by a suffix-array based algorithm and extends them to long highly similar pairs. Then...