Rahul Nayak
A Bioinformatician
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Postdoctoral position in bioinformatics @ Sweden
Information about the department The Department of Mathematical Sciences at Chalmers University of Technology and the University of Gothenburg has about 170 faculty and staff and is the largest department of mathematical sciences in the Nordic...ChromHMM: Chromatin state discovery and characterization
By Abhimanyu Singh 2808 days agocompbio.mit.edu - ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate multiple chromatin datasets such as ChIP-seq data of various histone modifications to discover de novo the major re-occuring combinatorial and spatial...STUDENTSHIP and TRAINEESHIP @ University of Madras
Bioinformatics Infrastructure Facility University of Madras Chennai 600 025 Applications are invited for the STUDENTSHIP and TRAINEESHIP vacancies to carry out project/research work in the DBT - Bioinformatics Infrastructure Facility with...DIAMOND
By Jit 2800 days agogithub.com - DIAMOND is a sequence aligner for protein and translated DNA searches and functions as a drop-in replacement for the NCBI BLAST software tools. It is suitable for protein-protein search as well as DNA-protein search on short reads and longer...
Data Mining in Bioinformatics
Last updated 4181 days ago by Jitendra NarayanData mining, the extraction of hidden predictive information from large databases. Data mining is becoming an increasingly important tool to transform this data into information. It is commonly used in a wide range of profiling practices, such as...Tetra-Nucleotide Analysis
By Jit 2793 days agochunlab.wordpress.com - A tetra-nucleotide is a fragment of DNA sequence with 4 bases (e.g. AGTC or TTGG). Pride et al. (2003) showed that the frequency of tetra-nucleotides in bacterial genomes contain useful, albeit weak, phylogenetic signals. Even though...Research with help of bioinformatics helpful
By Jit 4164 days agoBioinformatics and endocrinology ...A Post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs
By Abhimanyu Singh 2785 days agowww.sanger.ac.uk - PAGIT addresses the need for software to generate high quality draft genomes. It is based on a series of programs that we developed: ABACAS, that is able to contiguate contigs from a de novo assembly against a closely related reference. IMAGE, an...Five points for bioinformatics software/tools
By Jitendra Narayan 4161 days ago Comments (1)Some five points to keep in mind for bioinformatics software/toolsDownload assemblies from NCBI
By Bulbul 2782 days ago Comments (1)A new “Download assemblies” button is now available in the Assembly database. This makes it easy to download data for multiple genomes without having to write scripts.
