Poonam Mahapatra
Bioinformatics Researcher
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BLAST+ 2.10.0 released
By Jit 1803 days agoThe BLAST+ 2.10.0 release is now available from at FTP site. The new version offers the following improvements:Assistant Professor in Bioinformatics at Dr. D. Y. Patil Biotechnology & Bioinformatics...
Dr. D. Y. Patil Biotechnology & Bioinformatics Institute Tathawade, Pune 411033. Assistant Professor in Bioinformatics Essential : First Class Master’s Degree in the appropriate branch of Life Sciences / Technology (Tech.) OR Ph.D...New Layout for BLAST ftp Database Site
By Jit 1770 days ago Comments (1)New Layout for BLAST ftp Database SiteFaculty post at Zhejiang University
Zhejiang University (ZJU) is seeking faculty candidates for its newly launched, highly competitive and well funded “Hundred Talents Program”. This search covers all colleges and departments at ZJU. Applicants, expected to be about 35 years old,...bpRNA: large-scale automated annotation and analysis of RNA secondary structure
By Rahul Nayak 2378 days agogithub.com - bpRNA, a novel annotation tool capable of parsing RNA structures, including complex pseudoknot-containing RNAs, to yield an objective, precise, compact, unambiguous, easily-interpretable description of all loops, stems, and pseudoknots, along with...Smudgeplot: Inference of ploidy and heterozygosity structure using whole genome sequencing data
By Neel 1004 days agogithub.com - This tool extracts heterozygous kmer pairs from kmer count databases and performs gymnastics with them. We are able to disentangle genome structure by comparing the sum of kmer pair coverages (CovA + CovB) to their relative coverage (CovB / (CovA +...Genomic Medicine - Bruce Korf (2014)
By Neel 3807 days agoMay 21, 2014 - Current Topics in Genome Analysis 2014 A lecture series covering contemporary areas in genomics and bioinformatics. More: http://www.genome.gov/COURSE2014
Bioinformatics tools to detect horizontal gene transfer (HGT) in genomes
Last updated 1054 days ago by AbhiHorizontal gene transfer (HGT), the “non-sexual movement of genetic material between two organisms” , is relatively common in prokaryotes and single-celled eukaryotes, but a number of factors combine to make it far rarer in...Faculty Positions at Central University of Punjab
Faculty Positions: Rolling/Open Advertisement Advt.No: T-10 (2013) Pay Scale: Pay Band Rs.15600-39100 with AGP of Rs.6,000/- Essential Qualifications for Professors, Associate Professors, and Assistant Professors: As per “UGC REGULATIONS ON...MITObim - mitochondrial baiting and iterative mapping
By Rahul Nayak 2393 days agogithub.com - This document contains instructions on how to use the MITObim pipeline described in Hahn et al. 2013. The full article can be found here. Kindly cite the article if you are using MITObim in your work. The pipeline was originally developed...
