readthedocs.org - Bipype is a very useful program, which prepare a lot of types of bioinformatics analyses. There are three input options: amplicons, WGS (whole genome sequences) and metatranscriptomic data. If amplicons are input data, then bipype does...
github.com - Nucleus is a library of Python and C++ code designed to make it easy to read, write and analyze data in common genomics file formats like SAM and VCF. In addition, Nucleus enables painless integration with the TensorFlow machine learning framework,...
github.com - Flanker, a Python package which performs alignment-free clustering of gene flanking sequences in a consistent format, allowing investigation of mobile genetic elements (MGEs) without prior knowledge of their structure. Flanker can be...
http://scikit-bio.org/ - scikit-bio is currently in beta. We are very actively developing it, and backward-incompatible interface changes can and will arise. To avoid these types of changes being a surprise to our users, our public APIs are decorated to make it clear...
https://seq-lang.org -
Seq is a programming language for computational genomics and bioinformatics. With a Python-compatible syntax and a host of domain-specific features and optimizations, Seq makes writing high-performance genomics software as easy as writing...
*Science-Corps* *Providing an opportunity for recent PhD graduates, as Science-Corps Fellows, to teach science to underserved students and build science capacity in the developing world*
Interested in taking a six month break from the...
www.tutorialspoint.com - Online coding group for most of the programming languages.
Code in almost all popular languages using Coding Ground. Edit, compile, execute and share your projects, 100% cloud.
http://www.tutorialspoint.com/codingground.htm
liulab-dfci.github.io - This is the course material for STAT115/215 BIO/BST282 at Harvard University.
Xiaole Shirley Liu (lead instructor)Joshua StarmerMartin HembergTing WangFeng Yue
Ming TangYang LiuJack KangScarlett GeJiazhen RongPhillip NicolMaartin De Vries
We...