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HiCanu: accurate assembly of segmental duplications, satellites, and allelic variants from...
By BioStar 2173 days agogithub.com - HiCanu, a significant modification of the Canu assembler designed to leverage the full potential of HiFi reads via homopolymer compression, overlap-based error correction, and aggressive false overlap filtering. More...Project Assistant BioInformatics
Project Assistant BioInformatics Eligibility : ME/M.Tech(Bio-Informatics/Bio-Chemistry Engg), MSc(Bio-Informatics), BE/B.Tech Location : Pune Last Date : 16 Nov 2015 Hiring Process : Face to Face Interview No. Bio/NCIM/3...mixtureS: a novel tool for bacterial strain reconstruction from reads
By BioStar 2026 days agowww.cs.ucf.edu - mixtureS that can de novo identify bacterial strains from shotgun reads of a clonal or metagenomic sample, without prior knowledge about the strains and their variations. Tested on 243 simulated datasets and 195 experimental datasets, mixtureS...Pre- or postdoctoral research fellowship in Structural Bioinformatics at Padova
A research fellowship for a software developer is available at the BioComputing UP Laboratory, University of Padova (URL: http://protein.bio.unipd.it/). A highly motivated and creative candidate is sought to work on structural bioinformatics....LAST
By Archana Malhotra 3652 days agohttp://last.cbrc.jp/ - LAST can: Handle big sequence data, e.g: Compare two vertebrate genomes Align billions of DNA reads to a genome Indicate the reliability of each aligned column. Use sequence quality data properly. Compare DNA to proteins, with...SqueezeMeta: a fully automated metagenomics pipeline, from reads to bins
By BioStar 611 days agogithub.com - SqueezeMeta is a full automatic pipeline for metagenomics/metatranscriptomics, covering all steps of the analysis. SqueezeMeta includes multi-metagenome support allowing the co-assembly of related metagenomes and the retrieval of individual genomes...Traineeship at Biomedical Informatics Centre PGIMER Chandigarh
Biomedical Informatics Centre PGIMER Chandigarh invites application for a project dissertation program for students who have completed their first year of M.Sc. in Bioinformatics. This is an exciting opportunity for Master's students to...NxRepair: error correction in de novo assemblies using Nextera Mate Pair Reads
By BioStar 2601 days agogithub.com - NxRepair is a python module that automatically detects large structural errors in de novo assemblies using Nextera mate pair reads. The decector will break a contig at the site of an identified misassembly and will generate a new fasta file...RA Bioinformatics at Jamia Hamdard
Research Associate, Bioinformatics Facility Jamia Hamdard - New Delhi, Delhi Research Associate, Bioinformatics Facility, Jamia Hamdard. Emoluments: Rs. 22,000 + HRA 30% Qualification: PhD or equivalent or having 3 years of research, teaching...Trust But Verify: Sequencing Your Cell Lines Might Reveal an Uninvited Guest
By LEGE 279 days agoHigh-throughput sequencing has become indispensable in cell biology, enabling detailed insights into chromatin structure, gene expression, and regulatory dynamics. Yet, when faced with unexpectedly low mapping rates to the human genome,...
