http://gkno.me/ - gkno opens the world of complex bioinformatic analysis to people of all level of computational expertise. This site contains documentation, tutorials and information on all the tools that comprise gkno.
More at http://gkno.me/
glittr.org - Glittr is a curated list of bioinformatics training material.All material is:
In a GitHub or GitLab repository
Free to use
Written in markdown or similar
NOTE: This list of courses is selected only based on the above criteria.There...
fujiwara/perl-queue-q4pg-lite - simple message queue using PostgreSQL.
formbuilder/formbuilder - Perl CGI::FormBuilder module for generating, validating, and processing HTML forms
fastly/fastly-perl - Fastly perl...
France, as a major player in the fight against climate change and guarantor of the spirit of the Paris Agreement, is launching a new MOPGA visiting fellowship program geared towards strengthening scientific contributions to climate change issues...
www.ncbi.nlm.nih.gov - PATRISTICv1.0 is a java program that calculates patristic distances from large trees in a range of file formats and allows graphical and statistical interpretation of distance matrices calculated by other programs.
github.com - Rebaler is a program for conducting reference-based assemblies using long reads. It relies mainly on minimap2 for alignment and Racon for making consensus sequences.
I made Rebaler for bacterial genomes (specifically for the...
gitlab.mbb.univ-montp2.fr - CroCo is a program to detect cross contamination events in assembled transcriptomes using sequencing reads to determine the true origin of every transcripts.Such cross contaminations can be expected if several RNA-Seq experiments were prepared...
github.com - Turn (almost) any Python command line program into a full GUI application with one line
The easiest way to install Gooey is via pip
pip install Gooey
Alternatively, you can install Gooey by cloning the project to your local directory
git...
github.com - Recent technological progress has greatly facilitated de novo genome sequencing. However, de novo assemblies consist in many pieces of contiguous sequence (contigs) arranged in thousands of scaffolds instead of small numbers of...