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Epiviz: an interactive visualization tool for functional genomics data.
By Jit 3012 days agohttps://epiviz.github.io/ - Epiviz is an interactive visualization tool for functional genomics data. It supports genome navigation like other genome browsers, but allows multiple visualizations of data within genomic regions using scatterplots, heatmaps and other...Research Fellow in Bioinformatics @ Queen's University Belfast -Institute for Global Food...
Ref: 13/102900 Available immediately until 30th November 2015, to work on the development of bioinformatics approaches to aid analysis of data derived from the metabolomic profiling of biological matrices. The successful applicant will lead...VariantBam: Filtering and profiling of next-generational sequencing data using region-specific rules
By Rahul Nayak 2924 days agogithub.com - VariantBam is a tool to extract/count specific sets of sequencing reads from next-generational sequencing files. To save money, disk space and I/O, one may not want to store an entire BAM on disk. In many cases, it would be more efficient to store...JRF @ NATIONAL JALMA INSTITUTE OF LEPROSY AND OTHER MYCOBACTERIAL DISEASES
NATIONAL JALMA INSTITUTE OF LEPROSY AND OTHER MYCOBACTERIAL DISEASES (INDIAN COUNCIL OF MEDICAL RESEARCH) P.O BOX 101, Dr. M. Miyazaki Marg, Tajganj, Agra - 282001 Applications are invited for a walk-in interview to be held in the Seminar...EXCAVATOR: detecting copy number variants from whole-exome sequencing data
By Radha Agarkar 2832 days agosourceforge.net - EXCAVATOR, for the detection of copy number variants (CNVs) from whole-exome sequencing data. EXCAVATOR combines a three-step normalization procedure with a novel heterogeneous hidden Markov model algorithm and a calling method that classifies...Post-doc in Systems Genetics
Gagneur lab at Gene Center, Ludwig-Maximilians-Universitaet, Munich, Germany Deadline for applications : January 15, 2014. Description : We seek a talented and motivated post-doc to develop computational methods for inferring the molecular...nQuire: A statistical framework for ploidy estimation using NGS short-read data
By Jit 2805 days agogithub.com - nQuire implements a set of commands to estimate ploidy level of individuals from species, where recent polyploidization occurred and intraspecific ploidy variation is observed. Specifically, nQuire uses next-generation sequencing data to distinguish...Computer experts in biotechnology laboratory
By Jit 4690 days ago Comments (3)Only bioinformatician can understand that multiplication and division are different but same thing :) Disclaimer: This cartoon is solely designed to create humour and fun, not to offend any computer experts.Trelliscope: flexibly visualize large, complex data in great detail from within the R statistical...
By Jit 2451 days agodeltarho.org - Trelliscope provides a way to flexibly visualize large, complex data in great detail from within the R statistical programming environment. Trelliscope is a component in the DeltaRho environment. For those familiar with Trellis...
Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration with script
Last updated 4709 days ago by Manisha Mishra Comments (2)Hidden Markov Models, the Viterbi Algorithm, and CpG Islands (in VB6) Problem : The CG island is a stretch of DNA (usually longer than 200 bases) in which the frequency of the CG sequence is higher than other regions. It is also called the CpG...
