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SRF/JRF Bioinformatics at IARI
Agricultural Knowledge Management Unit ICAR-INDIAN AGRICULTURAL RESEARCH INSTITUTE L.B.S Building, Pusa Campus, New Delhi-110012 Walk-in-Interview: 18th December 2015 DBT funded project: Distributed Information Centre under BTISnet...
rHAT: a seed-and-extension-based noisy long read alignment tool
By Abhimanyu Singh 2925 days agogithub.com - rHAT is a seed-and-extension-based noisy long read alignment tool. It is suitable for aligning 3rd generation sequencing reads which are in large read length with relatively high error rate, especially Pacbio's Single Molecule Read-time (SMRT)...RA Bioinformatics at NIPGR
Applications are invited from suitable candidates for filling up the purely temporary positions of one Research Associate (RA) and one Junior Research Fellow (JRF) in the DBT Part-B Sub-project-1&2 entitled Transcriptome and epigenome diversity...ClipCrop: a tool for detecting structural variations with single-base resolution using...
By BioJoker 2806 days agogithub.com - ClipCrop for detecting SVs with single-base resolution using soft-clipping information. A soft-clipped sequence is an unmatched fragment in a partially mapped read. To assess the performance of ClipCrop with other SV-detecting tools, we generated...Project Assistant BioInformatics
Project Assistant BioInformatics Eligibility : ME/M.Tech(Bio-Informatics/Bio-Chemistry Engg), MSc(Bio-Informatics), BE/B.Tech Location : Pune Last Date : 16 Nov 2015 Hiring Process : Face to Face Interview No. Bio/NCIM/3...vt: a variant tool set that discovers short variants from Next Generation Sequencing data.
By Jit 2433 days agogenome.sph.umich.edu - vt is a variant tool set that discovers short variants from Next Generation Sequencing data. https://genome.sph.umich.edu/wiki/Vt https://github.com/atks/vtPre- or postdoctoral research fellowship in Structural Bioinformatics at Padova
A research fellowship for a software developer is available at the BioComputing UP Laboratory, University of Padova (URL: http://protein.bio.unipd.it/). A highly motivated and creative candidate is sought to work on structural bioinformatics....Filtlong: quality filtering tool for long reads
By Radha Agarkar 2327 days agogithub.com - Filtlong is a tool for filtering long reads by quality. It can take a set of long reads and produce a smaller, better subset. It uses both read length (longer is better) and read identity (higher is better) when choosing which reads pass the...LAST
By Archana Malhotra 3853 days agohttp://last.cbrc.jp/ - LAST can: Handle big sequence data, e.g: Compare two vertebrate genomes Align billions of DNA reads to a genome Indicate the reliability of each aligned column. Use sequence quality data properly. Compare DNA to proteins, with...truvari: Structural variant comparison tool for VCFs
By Jit 2278 days agogithub.com - Structural variant comparison tool for VCFs Given benchmark and comparsion sets of SVs, calculate the recall, precision, and f-measure. Spiral Genetics Motivation
