Comment on "Genome in a Bottle (GIAB) Consortium"
...alls, as well as calls in difficult genomic contexts (e.g., homopolymers/tandem repeats and difficult-to-map regions like pseudogenes and segmental duplications). GIAB is also...1614 days ago
Comment on "Perl script to count number of Ns in a multifasta file !"
...uniq -c 12 draft_summary.info:N 1035948 scaffolds.fasta:N 12 scaffolds_summary.info:N 900 updatedGenome.fa:N...1617 days ago
Comment on "Ten International Scholarships for Indian Biotechnology and Bioinformatics Students"
This list is updated regularly https://www.mendeley.com/research-funding/opportunities?keyword=bioinformatics1626 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
The Journal of Logic and Computation accept bioinformatics algorithms ans methods papers. https://academic.oup.com/logcom1648 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
SynChro seems to be the fastest synteny detection tool. http://www.lcqb.upmc.fr/CHROnicle/SynChro.html https://pdfs.semanticscholar.org/5320/68e328d1aaefa435eefe679f54c018e5c2aa.p...1648 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
NAR: Genomics and Bioinformatics publishes high quality research into genomics and bioinformatics, including novel computational or experimental methods and novel biological findings related to genomics, proteomics, transcriptomics, and epigenetics. https://academic.oup.com/nargab1913 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
Align Synteny - Beginning from completed or draft genomes, find shared syntenic regions and align them quickly while accounting for inversions, rearrangements, and duplications. http://www2.decipher.codes/AlignSynteny.html2028 days ago
Comment on "Indexcov: fast coverage quality control for whole-genome sequencing"
...## Package Plan ## environment location: /home/urbe/anaconda3 added / updated specs: - goleft The fo...be INSTALLED: goleft: 0.1.18-1 bioconda The following packages will be UPDATED: ca-certificates: 2018....2130 days ago
2153 days ago
Comment on "Ancestral sequence reconstruction steps !"
Parallelization of MAFFT for large-scale multiple sequence alignmentshttps://academic.oup.com/bioinformatics/article/34/14/2490/49160992175 days ago