Basic command-line to run BLAST
The goal of this tutorial is to run you through a demonstra...rab some cow and human RefSeq proteins: wget ftp://ftp.ncbi.ni...fseq/B_taurus/mRNA_Prot/cow.1.protein.faa.gz wget ftp://ftp.ncbi.n...e? grep -c '^>' cow.1.protein.faa grep -c '^>' human.1....2273 days ago
Popular bioinformatics educational resources !
Followings are the list of popular bioinformatics educational resources Bii.a-star.edu.sg Bio research and develo...ese include animated tutorials on topicssuch as BLAST, finding mutations in a protein, an...2221 days ago
List of motif discovery tools !
...ificity information about DNA-protein complexes. 3D-footprint:...ANCHOR -- Prediction of Protein Binding Regions in Disordered...acid residues and map them on protein structures. DBAli -- A D...discovery of long patterns in protein sequences Discover long patt...2022 days ago
Exchange Programme for Indian scientist !!
The Indian National Science Academy (INSA) is a premier scientific learned body (esta...ing all branches of science –Physical and Biological Sciences including Engineering, Medicine and Agricultural Sc...1628 days ago
Useful links to therapy, disease, drug and drug-target network data:
Useful links to therapy, disease, drug and drug-target network data: Drug...rimental) and >1500 non-redundant protein entries http://www.drugbank.c...ta of 890 drugs and 394 target human proteins http://www.nature.com/nbt/jo...com/1471-2105/8/353/additional/ [25] Protein lig...1462 days ago
Useful Bioinformatics Analysis Tools !
CoMeta Classificier of reads from metagenomic sequencing experimen...ltiple sequence alignments of proteins. • Deorowic...., CoMSA: compression of protein multiple sequence alignment f...designed for huge families of proteins (even containing hundreds of...892 days ago
List of comparative genomics resources !
3D-GENOMICS -- A Database to Compare Structural and Functional Annotations of Proteins between Sequenced Genomes Co...and functional annotations of proteins between sequenced genomes....olutionary analysis of DNA and protein sequences. MamPol -- a d...phylogenetics. PEDANT -- Protein Ext...706 days ago
Online resources on must-read papers in evolutionary biology, for a literature club
1. *Nick Barton:* - The textbook "Evolution" by Nick Barton, with resources for exploring the literatur...142-45. Testing for selection 1. McDonald & Kreitman. 1991. Adaptive protein evo...706 days ago
Must read paper and books in evolution biology !
1. *Nick Barton:* - The textbook "Evolution" by Nick Barton, with resources for exploring the literatur...142-45. Testing for selection 1. McDonald & Kreitman. 1991. Adaptive protein evo...606 days ago
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