Results for "NGS analysis"
Blogs
...stant to ‘char*’ [-Wwrite-strings] char * options = "Ad:g:u...Spines -fopenmp -c ./analysis/AACodons.cc -o obj/analysis/AACodons.o g++ -W -Wall -Wn...nalysis/NonRedKmerTable.o obj/analysis/sequenceUtil.o obj/analysis/s...usage info for tailored settings. #...2187 days ago
List of motif discovery tools !
In genetics, a sequence motif is a nuc...weep -- protein annotation by domain analysis Identify the domain architec...Protein ANnotation Diagram ORiented Analysis Find information about prote...ch approach to protein-binding sites analysis Predict the location of pote...2047 days ago
10 NGS services companies around the globe !
...s, regulomes, pre-sequencing, NGS barcode labels, and next gene...lows, compute resources, data analysis reports, and case studie...ome research, and bioservices analysis system consulting services. M..., Next Generation Sequencing (NGS), Bioservices and solutions to dom...1313 days ago
Bioinformatics tools for telomere to telomere assembly !
● Merfin – k-mer-based assembly and variant calling evaluation for...nscriptome data (Richard Kuo @GenomeRIK)● pbaa (PacBio Amplicon Analysis) – separates complex mi...1045 days ago
Protocol for De novo Genome Assembly using Illumina Reads
...the relevance of DNA to living things. For example, it may be used...ents for infectious diseases. Raw NGS dataReads can be saved as a F...nts between genomes from read mappings. Genome finishing tools:Semi...ice/ Frequent command use for the analysis are at: https://bioinformati...1258 days ago
Ancient whole genome duplication (WGD) detection tools !
...etection, one is collinearity analysis, and the other is based on th...ave posted articles about the analysis process of WGD. I searched fo...t conda activate wgdstart our analysis environment, and then start t...l-vs-ALl + MCL classification analysis. mix: Hybrid modeling of Ks...1209 days ago
Frequently used bioinformatics tools for viral genome analysis !
IVA: accurate de novo assembly of RNA virus genomes. Hunt M, Gall A, Ong SH, Brener J, Ferns B, Goulder P, Nastouli E, Keane JA, Kellam P, Otto TD. Bioinformatics. 2015...1101 days ago
Illumina based assembly pipeline steps !
Illumina Merge re-sequenced FastQ files (cat) Read QC (FastQC) Adapter trimmi...ant annotation (SnpEff, SnpSift) Consensus assessment report (QUAST) Lineage analysis (Pangolin) Clade assignment,...931 days ago
Useful Bioinformatics Analysis Tools !
CoMeta Classificier of reads from metagenomic sequencing experiments. • Kawulok, J., Deorowicz, S., CoMeta: Classification of Metagenomes Using k-...917 days ago
List of comparative genomics resources !
3D-GENOMICS -- A Database to Compare S...nomes Conduct comparative biometric analysis of chromosomes of different o...s/Metagenomes A data management and analysis system for metagenomes I...ams of phylogenetic and evolutionary analysis. PhyloPat -- the phyloge...731 days ago
