Results for "Data Mining Algorithm"
Blogs
Illumina based assembly pipeline steps !
Illumina Merge re-sequenced FastQ files (cat) Read QC (FastQC) Adapter...Primer sequence removal (iVar; amplicon data only) Duplicate read marking...iants and consensus; default for amplicon data |...mbly Primer trimming (Cutadapt; amplicon data only...904 days ago
Useful Bioinformatics Analysis Tools !
CoMeta Classificier of reads from metagenomic sequencing experi...g solution for raw sequencing data, Bioinformatics, 20...sed compression of sequencing data, Scientific Reports,&nbs...bsp;Disk-based compression of data f...t Multiple Sequence Alignment Algorithm Designed for Graphics Process...890 days ago
- Elgg is an open-source and highly customizable framework used for building an online socia...server, is written in PHP, and uses MySQL/MariaDB as a databa...es. systemctl restart apache2 Step 3 – Create a Database...
738 days ago
List of comparative genomics resources !
...nimalQTLdb -- a livestock QTL database tool set for positional QTL information mining and beyond Search for publ...arative Genometrics (CG) -- a database dedicated to biometric co...MBGD -- Microbial genome database for comparative analysis C...hensive suite of programs and databases...704 days ago
Understanding DUMP files from NCBI Taxonomy database !
*.dmp files are bcp-like dump from GenBank taxonomy database General information. Fie...-- node id in GenBank taxonomy database parent tax_id --...nt node id in GenBank taxonomy database rank -- rank of t...f this subtree has no sequence data y...bmed_id -- unique id in PubMed database...687 days ago
Interesting Bioinformatics Resources !
1. a reproducible workflow. https://www.youtube.com/watch?v=s3JldKoA0zw This two...in=false 3. Common-sense approaches to sharing tabular data a...cience/article/pii/S2666389921002300 4. A Reproducible Data Anal...568 days ago
Common methods to discover tandem repeats
Tandem repeats are DNA sequences that are repeated i...equences. The tool uses a statistical algorithm to identify repeats base...by comparing the input sequence to a databa...andem repeats that match those in the database. PCR-based methods: Polym...450 days ago
Common steps for reads mapping !
Mapping reads to a reference genome is an essential step...pper that is appropriate for your type of data and research question. I...own indexing tools. Prepare the read data:...t typically involves specifying the input data, ref...450 days ago
Calculate the significance of the difference between two trends
To calculate the significance of the difference between two trends, yo...be that there is a significant difference. Collect data on the two trends. Make sure that the data is i...445 days ago
Free Books on Machine Learning and Artificial Intelligent !
An Introduction to Statistical LearningThis book provides a broad and less...who wishes to use contemporary tools for data analysis. https://hastie.su.domains/ISLR2/ISLRv2_website.pdf Python Data S...cleaning, manipulating, and transforming data &mda...443 days ago
