Results for "C"
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Install ImageMagick from Unix Source
...Unix-like operating systems including Linux, Solaris, FreeBSD, Mac OS X, and others. A compiler...are required for pthreads... (cached) nochecking for PTHREAD_...whether char is unsigned... nochecking for an ANSI C-conformi...ld... nochecking for rpm... nochecking for 7za... 7zachecking...2174 days ago
chromoMap-An R package for Interactive visualization and mapping of human chromosomes
chromoMap is an R package that provides interactive, configurable and elegant graphics visualization of the human c...elements (like genes, SNPs etc.) on the chromosome plot. It...lize the data associated with chromosome elements (like gene...ormation and visualization specific for that location. You ca...2168 days ago
- ...ps/pull_reads_with_kmers.Tpo -c -o pull_reads_with_kmers.o pu...leIsHeader(const string&) const’: ./MakeDepend.cc:1339:3...^ ./GraphFromFasta_MPI.cc: In function ‘int main(int,...lib_type :Strand-specific RNA-Seq read orientation....
2161 days ago
Installing Salmon for Trinity !
...Trinity-v2.6.6 git:(master) ✗ conda install salmon Solving environment: done ## Package Plan ## environment location: /home/urbe/anaconda3 added / updated spe...py36_4 331 KB conda-forge jemalloc-5.1.0...############# | 100% jemalloc-5.1.0 | 8.2 MB | #####...2161 days ago
Converting a VCF into a FASTA given some reference !
Samtools/BCFtools (Heng Li) provides a Perl script vcfutils.pl which does this, the function vcf2fq (lines 469-528) This script has been modified by othe...f2fq.pl -f <input.fasta> <all-site.vcf> > <output.fastq>...2144 days ago
Julia Programming Language, a Python and R rival
Big data has grown to become one of the most lucrative fields. In fact, data scientists are some of the most...using programming languages such as R and Python. However, th...manipulating data. This is because it has numerous features...res Of Julia LanguageUses JIT CompilationParallelismDynamic T...2108 days ago
Setting python version as default on Linux
...ou have 3.1 installed. You'll next need to execute the following commands: sudo apt-get...ate-alternatives --config python This last command will allow you to choos...on sudo ln -s python3.1 /usr/bin/python Once you're done updating these p...2098 days ago
List of motif discovery tools !
In genetics, a sequence motif is a nucleotide or amino-acid sequence...tein post-translational modifications and find potential sing...Find the presence of O-GalNAc (mucin type) glycosylation si...ction of cell signaling interactions using short sequence mot...2021 days ago
How to set up SSH on Ubuntu 18.04
SSH, also known as Secure Shell or Secure Socket Shell, is a network protocol that gives users, particularly system administrators, a secure way to access a computer o...he SSH protocol. Here are the commands used to connect by Sec...orized_keys2Set pubkey authentication to "yes" sudo systemc...2019 days ago
Understating pacbio reads name !
m140415_143853_42175_c100635972550000001823121909121417_s1_p0/553/3100_11230 0.99 24...e of Run Start (yymmdd_hhmmss) Instrument Serial Number SMRT Cell Barcode Set Number (a.k.a. "Look Number". Deprecated field, used in earlier ve...2018 days ago
