Results for "UP"
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Illumina based assembly pipeline steps !
...2; optional) Variant calling Read alignment (Bowtie 2) Sort and index alignments (SAMtools) Primer sequence removal (iVar; amplicon data only) Duplicate read marking (picard; o...931 days ago
Useful Bioinformatics Analysis Tools !
...elative compression of genomes with random access, Bioinformatics, 2011; 27(21):2979–2986, GTC Genotype databases compressor with support for fast queries. •...917 days ago
- ...essaging, microblogging, file-sharing, RSS support, access control, groups, and many more. In...20.04 server, run the following command to update your base system with the..._execution_time = 300 memory_limit = 512M upload_max_filesize = 100M date...
765 days ago
List of comparative genomics resources !
...te conserved non-coding blocks from upstream regions of putative ort...EPGD -- Eukaryotic Paralog Group Database Find eukaryotic par...og of eukaryotic orthologs Find groups of orthologous genes. O...omic libraries from a designated group of species. VISTA -- Com...731 days ago
- ...control show node=<nodename> You can also specify a group of nodes in the command above...ENDED Job is suspended. TO TIMEOUT Job terminated upon reaching its time limit....
723 days ago
Understanding DUMP files from NCBI Taxonomy database !
...node id in GenBank taxonomy database rank -- rank of this node (superkingdom, kingdom, ...) ...n flag (1 or 0) -- 1 if name is suppressed in GenBank entry linea...714 days ago
- https://www.ncbi.nlm.nih.gov/nuccore/OM101125,OM101126,OM101127,OM101128,OM101129,OM101130? Zoonotic Henipavirus https://pubmed.ncbi.nlm.nih.gov/35921459/ https://...
686 days ago
Interesting Bioinformatics Resources !
...ge your mind on reproducible research 2. Parallel sequencing lives, or what makes large sequencing projects successful https://academic.oup.com/gigascience/article/6/11/...595 days ago
- ...he problem of protein folding.To read more: https://www.rasalsi.com/courses/computer-aided-drug-discovery/the-limitations-of-alphafold2-2/ For more updates like this follow us on:...
592 days ago
Bioinformatics tools to explore SSRs in genomes !
...primers for SSRs in various organisms. QDD: QDD (Quick Detection of Duplication) is a software tool that can identify SSRs in DNA sequences and can also identify duplicate loci. It can be used to...479 days ago
