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REGEN: Ancestral Genome Reconstruction for Bacteria
...uding gene creation and deletion and replicon fission and fusion. The reconstruction can be performed by either a maximum parsimony or a maximum likelihood method. Gene content reconstr...2307 days ago
MCMCTREE: a phylogenetic program for Bayesian estimation of species divergence times
...analyze an easy example modified from dataset of Inoue et al. (2010). Here we conduct a commonly used time estimation method, "Approximate Likelihood Method", for the datasets inc...2219 days ago
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