Results for "graphical"
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Laj: viewing and manipulating the output from pairwise alignment programs
...ation links to other web sites containing additional information about particular regions. The program is written in Java in order to provide a graphical user interface that is portab...2640 days ago
GeneProf: analysis of high-throughput sequencing experiment
GeneProf is a web-based, graphical software suite that allows users to analyse data produced using high-throughput sequencing platforms (RNA-seq and ChIP-seq; "Next-Generation Sequen...2514 days ago
- FigTree is designed as a graphical viewer of phylogenetic trees and as a program for producing publication-ready figures. As with most of my programs, it was written for my own needs...
2500 days ago
Mulan: MUltiple sequence Local AligNment and conservation visualization tool
...species. It combines refine and tba tools to align either "draft" or "finished" quality sequences. Mulan provides a dynamic graphical interface to align and visual...2499 days ago
- PATRISTICv1.0 is a java program that calculates patristic distances from large trees in a range of file formats and allows graphical and statistical interpretation of distance matrices calculated by other programs.
2481 days ago
CHSMiner: a GUI tool to identify chromosomal homologous segments
...etects CHSs based on shared gene content alone. It implements fast greedy search algorithm and rigorous statistical validation, and its friendly graphical interface allows interactive...2378 days ago
Taxoblast : Taxoblast is a pipeline to identify contamination in genomic sequence
...amination making the detection of foreign DNA sequences an important part of analysis pipelines. Here we use Taxoblast, a simple pipeline with a graphical user interface, for the post-...2373 days ago
- Synteny Imaging tool (Synima) written in Perl, which uses the graphical features of R. Synima takes orthologu...e Synima package, and a pipeline for their use. Synima has a range of graphical parameters including size, co...
2356 days ago
Bandage: interactive visualization of de novo genome assemblies
...nd interact with it by moving nodes, adding labels, changing colors and extracting sequences. BLAST searches can be performed within the Bandage graphical user interface and the hits a...2362 days ago
- We have developed the Sequence Ontology Bioinformatics Analysis (SOBA) tool to provide a simple statistical and graphical summary of an annotated genome. We envisage its use during ann...
1401 days ago
