simNGS and simLibrary – Software for Simulating Next-Gen Sequencing Data
simNGS is software for simulating observations from Illumina sequencing machines using the statistical models behind the AYB base-calling software. By default, observations onl...2408 days ago
PLAST: A fast, accurate and NGS scalable bank-to-bank sequence similarity search tool
PLAST is a fast, accurate and NGS scalable bank-to-bank s...the Blast suite of algorithms. Relying on unique software architecture, PLAST takes ful...not require any additional hardware, since it is a software solution. It is easy to insta...2405 days ago
MetaSim A Sequencing Simulator for Genomics and Metagenomics.
Our software can be used to generate collections of synthetic reads that reflect the diverse taxonomical composition of typical metagenome data sets. Based on a...2402 days ago
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NanoSim: nanopore sequence read simulator based on statistical characterization.
NanoSim, a fast and scalable read simulator that captures the technology-specific fea...le at the Genome Sciences Centre website: http://www.bcgsc.ca/platform/bioinfo/software/nanosim https://github.com/b...2388 days ago
xmatchview: smith-waterman alignment visualization
xmatchview and xmatchview-conifer are imaging tools for comparing the synteny between...mparing DNA sequences that is sensitive. http://www.bcgsc.ca/platform/bioinfo/software/xmatchview2378 days ago
CAMSA :: a tool for Comparative Analysis and Merging of Scaffold Assemblies
CAMSA – is a tool for Comparative Analysis and Merging of Scaffold Assemblies, distributed both as a standalone software package and as Python library...2378 days ago
Seal: SEquence ALignment evaluation suite
Seal is a comprehensive sequencing simulation and alignment tool evaluation suite. This software (implemented in Java) provide...Seal has interfaces to evaluate the following software packages: Bowtie BWA MAQ...2372 days ago
Mobyle: a new full web bioinformatics framework
Mobyle, to provide a flexible and usable Web environment for defining and running bio...without the user having to learn complex concepts or to install sophisticated software....2367 days ago