NanoSim: nanopore sequence read simulator based on statistical characterization.
NanoSim, a fast and scalable read simulator that captures the technology-specific features of ONT data and allows f...at the Genome Sciences Centre website: http://www.bcgsc.ca/platform/bioinfo/software/na...2382 days ago
Building Web UIs With Mojolicious Perl
Mojolicious is one of 3 leading web frameworks available i...rite. Mojolicious aims to provide a complete web development experience. It thus has no hard dependencies, comes with a built-in development and production server and man...2374 days ago
Ra assembler - a de novo DNA assembler for third generation sequencing data
Integration of the Ra assembler - a de novo DNA assembler for third generation sequen...Boskovic Institute (RBI) and Genome Institute of Singapore (GIS). Ra is in development since 2014 in the form of sev...2373 days ago
xmatchview: smith-waterman alignment visualization
xmatchview and xmatchview-conifer are imaging tools for comparing the synteny between DNA sequences. It allows user...aring DNA sequences that is sensitive. http://www.bcgsc.ca/platform/bioinfo/software/xm...2372 days ago
CAMSA :: a tool for Comparative Analysis and Merging of Scaffold Assemblies
CAMSA – is a tool for Comparative Analysis and Merging of Scaffold Assemblies, distributed both as a standalone software pa...2372 days ago
Seal: SEquence ALignment evaluation suite
Seal is a comprehensive sequencing simulation and alignment tool evaluation suite. This software (implemented in Java) provides several utilities that can be...curacy. Seal has interfaces to evaluate the following software pa...2366 days ago
Mobyle: a new full web bioinformatics framework
Mobyle, to provide a flexible and usable Web environment for defining and running bioinformatics analyses. It embed...ithout the user having to learn complex concepts or to install sophisticated software.2362 days ago
mojolicious: a next generation web framework for the Perl programming language.
Back in the early days of the web, many people learned Perl because of a wonderful Pe...Unicode support and much more for you to discover. A powerful web development toolkit, that you can use for...2357 days ago
Dot, an interactive viewer for genome-genome comparison
Dot, an interactive dot plot viewer that allows genome scientists to visualize genome-genome alignments in order to...supports the output of MUMmer’s nucmer aligner the most commonly used software me...2355 days ago
HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution
Software accompanying "HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution" Preprint: http://biorxiv.org/content/early/2016/08/01/062117 Paper:&nb...2331 days ago