Musket: a multistage k-mer spectrum based corrector
...ly one of the top performing substitution-error-based correctors. In addition, Musket is multi-threaded using a master-slave model and demonstrates superior parallel scalability com...2400 days ago
2397 days ago
2395 days ago
NanoSim: nanopore sequence read simulator based on statistical characterization.
NanoSim, a fast and scalable read simulator that captures the technology-specific features of ONT data and allows for adjustments upon improvement of nanopore sequencing technology....2388 days ago
AIRVF: a filtering toolbox for precise variant calling in Ion Torrent sequencing
...w and mapped reads and called variants to reduce artifact-driven false variant calls. Tests on sequencing data of standard reference material showed up to ∼98% reduction of fals...2384 days ago
Japanese Multi Omics Reference Panel, jMorp
...We could measure several thousands of metabolites including the uncharacterized ones, and several hundreds of proteins until now. https://academic.oup.com/nar/advance-article/doi/1...2383 days ago
PASA: Gene Structure Annotation and Analysis
...ture annotation consistent with the most recently available experimental sequence data. PASA also identifies and classifies all splicing variations supported by the transcript align...2379 days ago
2379 days ago
CAMSA :: a tool for Comparative Analysis and Merging of Scaffold Assemblies
...rogressive fashion allows to simultaneously work with scaffold assemblies obtained from any in silico and in vitro techniques, supporting multiple existing form...2378 days ago
3d-dna: 3D de novo assembly (3D DNA) pipeline
...is paper. Specifically, some of the terminology used below is outlined in Figure S2. The assembly procedure is described in detail in the Supporting Online Materials, spec...2378 days ago