Results for "Code Search"
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odgi: optimized dynamic genome/graph implementation
odgi provides an efficient and succinct dynamic DNA sequence graph model, as well as a host of algorithms that allow the use of such graphs in bioinformatic analys...878 days ago
AGORA: Algorithm for Gene Order Reconstruction in Ancestors
AGORA stands for “Algorithm for Gene Order Reconstruction in Ancestors” and was developed by Matthieu Muffato in the DYOGEN Laboratory at the École n...851 days ago
SeqFu: A Suite of Utilities for the Robust and Reproducible Manipulation of Sequence Files
A general-purpose program to manipulate and parse information from FASTA/FASTQ files, supporting gzipped input files. Includes functions to interleave and&nbs...851 days ago
GenomeQC: a quality assessment tool for genome assemblies and gene structure annotations
The GenomeQC web application is implemented in R/Shiny version 1.5.9 and Python 3.6 and is freely available at https://genomeqc.maizegdb.org/ under the GPL license. All source code a...772 days ago
- For the longest time I did not know what everything meant in htop. I thought that load average 1.0 on my two core machine means that the CPU usage is at 50%. That's not quite right. And also, why does it say 1.0? I decided to look everything up and document it here.
724 days ago
- ElasticBLAST is a new way to BLA...RGER queries! ElasticBLAST can search query sets that have hun...FASTER ElasticBLAST distributes your searches across multiple cloud insta...deallocates cloud resources when the searches are done. ElasticBLAST&nbs...
661 days ago
- This part of the documentation describes the snakemake executable. Snakemake is primarily a command-line tool, so the snakemake executable is the pr...
642 days ago
- https://cov-spectrum.org/explore/World/AllSamples/ CoV-Spectrum supports a wide range of search queries. The following sections presents search options of the basic search bar. For information on the advanced search
642 days ago
- https://cov-spectrum.org/explore/World/AllSamples/ CoV-Spectrum supports a wide range of search queries. The following sections presents search options of the basic search bar. For information on the advanced search
642 days ago
- There is a directory for each chapter of the book. Each directory contains a test.py program you can use...included a short README to describe each exercise. If you have problems writing code (...
530 days ago
