Results for "Biology to computer"
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Spines Spines is a collection of software tools, developed and used by the Vertebrate Genome Biology Group at the Broad Institute....p://www.broadinstitute.org/science/programs/genome-biology/...3067 days ago
PEAR: a fast and accurate Illumina Paired-End reAd mergeR
PEAR is an ultrafast, memory-efficient and highly accurate pair-end read merger....millions of paired end reads within a couple of minutes on a standard desktop computer. More at http://www.exe...3010 days ago
SATSUMA : Highly sensitive whole-genome synteny alignments.
Satsuma is a whole-genome synteny alignment program. It takes two genomes, computes alignments, and then keeps only the parts that are orthologous, i.e. following the co...2973 days ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualis...a QC step Blaxter Lab, Institute of Evolutionary Biology, University of Edinburgh Goa...nbsp;Frontiers in Bioinformatics and Computational Biology...
2942 days ago
- statistical analysis and visulization of functional profiles for genes and gene clustersBioconductor version: Relea...biological themes among gene clusters.” OMICS: A Journal of Integrative Biology,...
2938 days ago
- CSBB is a command line based bioinformatics suite to analyze biological data acquired through varied avenues of bio...n background for specific modules. Major focus of CSBB is to allow users from biology...
2926 days ago
- A probabilistic framework for structural variant discovery. Ryan M Layer, Colby Chiang, Aaron R Quinlan, and Ira M.... "LUMPY: a Probabilistic Framework for Structural Variant Discovery." Genome Biology...
2869 days ago
OPERA : Optimal Paired-End Read Assembler
OPERA (Optimal Paired-End Read Assembler) is a sequence assembly program (http://en.wikipedia.org/wiki/Sequence_ass...script describing the new features and algorithms is available at Genome Biology....2854 days ago
CGView - Circular Genome Viewer
GView is a Java package used to display and navigate bacterial genomes. GView is useful for producing high-quality genome maps for use in publications and websites, or a...2844 days ago
VirtualFlow: a versatile, parallel workflow platform for carrying out virtual screening
related tasks on Linux-based computer clusters of any type and size which are managed by a batchsystem (such as SLURM). Currently, there exist two versions of VirtualFl...1481 days ago
