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...considered a validated HGT product. We first employed the technique to a set of three E. coli st...ed the method to existing HGT detection tools using a larger strain data set. When combined with addition...2892 days ago
- ...es to automatically identify patterns in data. These techniques can be used to make highly accurate predictions. Keep scrolling. Using a data set about homes, we will create a...
2883 days ago
- ...als.Genome STRiP looks both across and within a set of sequenced genomes to detec...ods are adaptive and support heterogeneous data sets, including variations in seq...otyping on a single sequenced genome or a small set of genomes, you need to call...
2816 days ago
- Gene finding in eukaryotic genomes is notoriously difficult to automate. The task is to design a work flow with a minimal set of tools that would reach state-of-the-art performance...
1969 days ago
- ...cal assembler, fermi also aims to preserve heterozygotes which are often collapsed by other assemblers. Its ultimate goal is to find a minimal set ofunitigs to represent all th...
2813 days ago
BLAST Ring Image Generator (BRIG)
...ustomized graphs and annotations can be displayed. Using a user-defined set of genes as input, BRIG can display gene presence, absence, truncation or sequence variation in a set of complete genomes, draft ge...2792 days ago
Nemo – A stochastic, individual-base, genetically explicit simulation platform
...ions (chromosomal) for neutral markers (e.g. SNPs) and loci under selection (QTLs, deleterious mutations, DMIs) can now be specified explicitly, or set at random. The map can hold a...2791 days ago
- ...on. There are common options for most BBMap suite programs and depending on the file extension the input/output format is automatically chosen/set. Using BBMap Mapping Nano...
2782 days ago
- Watch out: only a few files are counted in coverage statistics. Full documentation on Read the Docs. A set of tools for viral metagenomics. virmet is called with a command s...
2782 days ago
- ...a method to view the tissue specific regulatory component of a set of EWAS DMPs. eFORGE analysis takes a set of DMPs, such as those hits a...e tissue-specific signals of enrichment for the given test DMP set. This can reveal the sites of...
2764 days ago
