Results for "NT"
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...annotation of structural variants can be complex. This is due to the different resolution that variants are...ore, multiple rearrangements in a single area of the geno...ribes the one or more breakpoints which make up a structural&n...hly 40Mb on chromosome 11). Syntax is based on HGVS mutation n...2830 days ago
- Development of cancer is driven by somatic...chromosomal aberrations. Currently, several computational meth...ons (CNAs) of chromosomal segments in tumor genomes. However, t...ated chromosomal breaks and identify genes that appear non-rand...aks that were previously pinpointed by the segmentation algorit...
2211 days ago
- AccNET is a Perl application that presents a new way to study the accessory genome of a given set of organ...y. Networks offer a new perspective of organism organization through elements acquired by horizontal gene...
2824 days ago
- ...ort RNA) expression using short-read deep sequencing data. In its present implementation MIRO is especially adapt...ap them flexibly to several reference genomes using one of four different mappers, create differential...
2827 days ago
- BBMAP • a solution for everything That content has been reformatted and it is being expanded to inc...BMap.sh has a length cap of 6kbp. Reads longer than this will be broken into 6kbp pieces and mapped indep...
2821 days ago
- Watch out: only a few files are counted in coverage statistics. Full documentation on Read the Docs. A set of tools for viral metagenomics. virmet is called with a command subcommand syntax: virmet fetch --viral...
2821 days ago
- ...samples of DNA from uncharacterized environments that may contain hundreds or even thousands...genetic classification of raw sequence reads into groups representing the same...quences as short as 100 base pairs (bp) have until now been relatively inaccur...
2821 days ago
Entrez Direct: E-utilities on the UNIX Command Line
Entrez Direct (EDirect) is an adva...accessing the NCBI's suite of interconnected databases (publica...terms from command-line arguments. Individual operations are c...EDirect also provides an argument-driven function that simplifi...s that cannot be accomplished entirely within Entrez.2812 days ago
- ...as played an extremely important role in the current genomic revolution to inspect and understand variants, expression patterns, evolut...genome sequencing did not identify a direct chromosomal fusio...rity between species. Supplementary Note 4 shows a comparison...
2810 days ago
- ...considerations in the process of successfully converting data into graphics. For example, rendering interactive heatmaps from large i...footprint program, making it particularly well-suited for the interactive visualization of extr...
2810 days ago
