Bioinformatics Training Material !
Glittr is a curated list of bioinformatics training material.All material is: In a GitHub...Written in markdown or similar NOTE: This list of courses is selected only based on...475 days ago
Metabuli 분리 improves metagenomic read classification
Metabuli 분리 improves metagenomic read classification through metamers, DNA-AA k-mers, to b...ly analyze both DNA and amino acid (AA) sequences. DNA-based classifi...ploiting point mutations to distinguish close taxa. AA-based cla...397 days ago
PhyloHerb: A high‐throughput phylogenomic pipeline for processing genome skimming data
Phylogenomic Analysis Pipeline for Herbarium Specimens What is PhyloHerb: PhyloHerb...pper program to process genome skimming data collected from plant materials. The outcomes include the pla...303 days ago
ReConPlot: an R package for the visualization and interpretation of genomic rearrangements
ReConPlot (REarrangement and COpy Number PLOT), an R package that provides functionalities for the...int visualization of SCNAs and SVs across one or multiple chromosomes. ReConPlot is based on...204 days ago
Orthoflow: workflow for phylogenetic inference of genome-scale datasets of protein-coding genes
Orthoflow is a workflow for phylogenetic inference of genome-scale datasets of protein-coding gene...It uses several state of the art inference methods for orthology inference, either based on...135 days ago
PhyloHerb: Phylogenomic Analysis Pipeline for Herbarium Specimens
What is PhyloHerb: PhyloHerb is a wrapper program to process genome skimming data collected from plant materials. The outcomes include the pla...135 days ago
CLAW: Chloroplast Long-read Assembly Workflow
CLAW (Chloroplast Long-read Assembly Workflow) is an mostly-automated Snakemake-based workflo...135 days ago
doubletrouble: identify duplicated genes from whole-genome protein sequences and classify
doubletrouble aims to identify duplicated genes from whole-genome protein sequences and classify them based on their...Models (GMMs), and classify gene pairs into age groups based on...122 days ago
ExRec: Exclusion of Recombined DNA
ExRec (Exclusion of Recombined DNA) is a Python pipeline that implements the four-gamete test to f...es by providing loci that better meet the no-recombination assumption in coalescent-based ana...99 days ago
99 days ago