Apollo: First instantaneous, collaborative genomic annotation editor available on the Web
...transposable elements; each annotation type has its own configuration of the ‘Information Editor’. History tracking with undo/redo functions is available. Users are able...1843 days ago
MSAProbs - Parallel and accurate multiple sequence alignment
...sequence alignment algorithm for protein sequences. The design of MSAProbs is based on a combination of pair hidden Markov models and partition functions to calculate posterior probab...1803 days ago
Bioinformatics web development course
...l you will learn the fundamental concepts of programming by using scripting languages: variables, types, arrays, cycles, conditional statements, functions, objects, regular expressions...1683 days ago
LibsDyogen: Libibrary for comparative genomics
Library of usual classes and functions written in python and used in the Dyogen team for comparative genomics applications. Collaborative python library used in the DYOGEN teamfor studying the evolution of gene order in vertebrates. http://www.ibens.ens.fr/?rubrique43&lang=fr1635 days ago
jtools : more efficient presentation of regression analyses
This package consists of a series of functions created by the author (Jacob) to auto...f regression analyses. There are a number of functions for other programming and sta...sp;As of jtools version 2.0.0, all functions dealing with interactions (e....1586 days ago
gggenomes: A grammar of graphics for comparative genomics
gggenomes is a versatile graphics package for comparative genomics. It extends the popular R visualization packageggplot2 by adding dedicated plot functions for genes, syntenic regions, etc. and verbs to manipulate the plot to, for example, quickly zoom in into gene neighborhoods.1231 days ago
Kmer: a suite of tools for DNA sequence analysis
...is a utility program for working with multi-fasta files. In addition to providing random access to the base level, it includes several analysis functions. Meryl: An out-of...1033 days ago
SeqFu: A Suite of Utilities for the Robust and Reproducible Manipulation of Sequence Files
A general-purpose program to manipulate and parse information from FASTA/FASTQ files, supporting gzipped input files. Includes functions to interleave and de-interleave&...838 days ago
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