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...of the tabix package, available for download here). The VCF files can be compressed and indexed using the following commands bgzip my_file.vcftabix -p vcf my_file.vcf.gz http://v...2125 days ago
Snippy: Rapid haploid variant calling and core SNP phylogeny
...a set of Snippy results using the same reference and generate a core SNP alignment (and ultimately a phylogenomic tree). snippy --cpus 16 --outdir mysnps --ref Listeria.gbk --R1 F...2053 days ago
Genome Annotation using MAKER tutorial !
...includes MAKER, has some nice tutorials online for running MAKER. However, these were quite simplified examples and it took a bit of effort to wrap my head completely around everyt...1990 days ago
- ...y (described later)--------------------------------------------------------------------------- tax_id: the unique identifier provided by NCBI Taxonomy for the species or strain/iso...
1969 days ago
Osprey: Network Visualization System
...by the BioGRID. Osprey is developed by the TyersLab and is a part of the BioGRID family of software. It utilizes both MySQL and Java to...1960 days ago
ansible: Simple, agentless IT automation that anyone can use
Ansible is a universal language, unraveling the mystery of how work gets done. Turn tough tasks into repeatable playbooks. Roll out enterprise-wide protocols with the push of a button. Give your team the tools to automate, solve, and share.1872 days ago
LRSDAY: Long-read Sequencing Data Analysis for Yeasts
...g complex genomic regions. As a leading model organism with small genome size and great biotechnological importance, the budding yeast, Saccharomyces cerevisiae, has many isola...1741 days ago
Retrieving Taxonomic Information with R
...introduce users to the retrieval of taxonomic information with myTAI. The taxonomy() function implemented i...s, taxonomic information retrieval has been customized for the myTAI standard and for orga...1739 days ago
WOS-C Women Scientist Scheme KIRAN-IPR
...the field of mainstream science with a special focus on Intellectual Property Rights (IPR). WOS-C Women Scientist Scheme aims to train women from a myriad of scientific backgrounds...1618 days ago
- ...rs today and considers itself as a joint representation of interests of bioinformatics research in Germany and as an interlocutor for politics, economy, and society aiming at a stro...
1574 days ago
