Results for "online training program"
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MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping
MOSAIK is a stable, sensitive and open-source program for mapping second and third-generation sequencing reads to a reference genome. Uniquely among current mapping tools, MOSAIK can align re...2959 days ago
- The Genome Assembly Evaluation Metrics and Reporting (GAEMR)...sed a number of integrated modules. These modules can be executed as a single program to generate a complete analys...
2934 days ago
CNIDARIA: fast, reference-free phylogenomic clustering
Motivation: Identification of biological specimens is a major requirement for a range of appli...il.com Supplementary information: Supplementary data are available at Bioinformatics online.2932 days ago
Linux command line exercises for NGS data processing
The purpose of this tutorial is to introduce students to th...sing Workflow. In Linux, we use a shell that is a program that takes your commands from...ell (bash), but there are several additional shell programs on a typical Linux system su...2926 days ago
Kraken: ultrafast metagenomic sequence classification using exact alignments
Kraken is an ultrafast and highly accurate program for assigning taxonomic labels...genomic DNA sequences. Previous programs designed for this task have...use faster abundance estimation programs, which only classify small s...r than the abundance estimation program MetaPhlAn. Kraken is availabl...2921 days ago
- Kaiju is a program for the taxonomic classification of metagenomic high-throughput sequencing reads. Each read is directly assigned to a taxon within the NCBI taxonomy by com...
2921 days ago
- CrossMap is a program for convenient conversion of genome coordinates (or annotation files) betw...liftover genome coordinates between assemblies. It’s not a program for aligning sequences to ref...
2851 days ago
- This tutorial includes resources for learning more about PacBio data and bioinformatics a...for both beginners and experts. Below are links to training modules (webinars and PowerPo...well as information for specialized applications. Trainin...
2679 days ago
- Bambus 2.0, the second generation Bambus scaffolder available as an open source...package. While most other scaffolders are closely tied to a specific assembly program, Bambus accepts the output fr...
2871 days ago
AutoDock Vina: an open-source program for doing molecular docking.
AutoDock Vina is an open-source program for doing molecular docking. It was designed and implemented by Dr. Oleg Trott in the Molecular Graphics Lab at The Scripps Resea...1474 days ago
