2065 days ago
lordFAST: sensitive and Fast Alignment Search Tool for LOng noisy Read sequencing Data
lordFAST is a sensitive tool for mapping long reads with high error rates. lordFAST is specially designed for aligning reads from PacBio sequencing technology but prov...2047 days ago
SISRS: Site Identification from Short Read Sequences
Next-gen sequence data such as Illumina HiSeq reads. Data must be sorted into folders by taxon (e.g. species or genus). Paired reads in fastq format must be specified by _R1 and _R2 in the (otherwise identical) filenames. Paired and unpaired reads must have a fastq file extension.2046 days ago
GWASpro: A High-Performance Genome-Wide Association Analysis Server
GWASpro supports building complex design matrices, by which complex experimental de...ounted for in the linear mixed model (LMM). GWASpro is optimized to handle GWAS data that may consist of up to 10...2037 days ago
KEGG Mapper – Reconstruct Pathway
Reconstruct Pathway is a KEGG PATHWAY mapping tool that assists genome and metagenome annotations. The input data is a single gene list (for a...2032 days ago
2032 days ago
SiLiX: implements an ultra-efficient algorithm for the clustering of homologous sequences
The software package SiLiX implements an ultra-effi...efficient algorithm, based on the Disjoint Sets Data Structure, allows the computa...ble, so that its allows the study of very large datasets. SiLiX is already includ...2032 days ago
2026 days ago
Biotite: A general framework for computational biology
The package is open source and freely avai...our sub packages: sequence, structure, databases, and application. The&nb...he analysis of sequence and structural data analysis respectively, d...on working with sequence and structure data and supports various file for...2026 days ago
ALLHiC: Phasing and scaffolding polyploid genomes based on Hi-C data
The major problem of scaffolding polyploid genome is that Hi-C signals are frequently detected between allelic haplotypes and any existing stat of art Hi-C scaffolding...2024 days ago