Updated science-wide author databases of standardized citation indicators
There was great interest in the databases of standardized citation metrics across all scientists and scie...nd of 2019 (Table-S6-career-2019) and for citation impact during the single calendar year 2019 (Table-S7-singleyr-2...1327 days ago
DnaSP: DNA Sequence Polymorphism, is a software package for the analysis of DNA polymorphisms
DnaSP, DNA Sequence Polymorphism, is a software package for the analysis of DNA polymorphisms using data from a single loc...1317 days ago
MAGIC: A tool for predicting transcription factors and cofactors driving gene sets using ENCODE data
The algorithm presented herein, Mining Algorithm for GenetIc Controllers...s in 4 settings: 1) A cell line expressing or lacking single T...3) Whole brain samples from WT mice or mice lacking a single TF...1317 days ago
Applied Computational Genomics Course at UU: Spring 2020
This course will provide a comprehensive introduction to fundamental concepts and expe...cal strategies. A diverse range of biological questions enabled by modern DNA sequencing technologies will be explored...1290 days ago
FastProNGS: fast preprocessing of next-generation sequencing reads
FastProNGS to integrate the quality control process with automatic adapter removal. Parallel processing was implemented to speed up the process by allocating multiple threads. Compared with similar up-to-date preprocessing tools, FastProNGS is by far the fastest.1287 days ago
1253 days ago
Ktrim: an extra-fast and accurate adapter- and quality-trimmer for sequencing data
Ktrim is written in C++ for GNU Linux/Unix platforms. After uncompressing the source package, you can find an executable file ktrim under bi...1239 days ago
311 days ago
FiNGS: Filters for Next Generation Sequencing
Key features Filters SNVs from any variant caller to remove false positives Calcul...nd emits standard variant call format (VCF) files and will slot into existing sequencing pipelines. It allows users to...1224 days ago
AlignGraph2: similar genome-assisted reassembly pipeline for PacBio long reads
AlignGraph2 is the second version of AlignGraph for PacBio long reads. It extends and refines contigs assembled from the long reads with a published genome similar to the sequencing genome. More at https://academic.oup.com/bib/advance-article-abstract/doi/10.1093/bib/bbab022/61467721209 days ago