Results for "Statistical Data Analysis"
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AccNET is a Perl application that presents a new way to...a bipartite network compatible with common network analysis platforms. AccNET collects ph...functional information in a network improving the analysis capability. Networks offer a...2795 days ago
YASS :: genomic similarity search tool
YASS is a genomic similarity search tool, for nucleic (DNA/RNA) sequences in fasta or plain...rameterizable output filter for low complexity repeats reporting of various alignment statisti...2953 days ago
- High-throughput genomics has revolutionized biological research, however, while the number of sequenced genomes...rom hundreds of species, to gauge completeness of rapidly accumulating genomic data and...
2945 days ago
- Cutadapt finds and removes adapter sequences, primers, poly-A tails and other types of...ur high-throughput sequencing reads. Cleaning your data in this way is often required...racters. Also, paired-end reads and even colorspace data is...
2942 days ago
- Platanus is a novel de novo sequence assembler that can reconstruct genomic sequences of highly heterozygous diploids from massively parallel shotgun sequencing data. T...
2942 days ago
Hagfish - assess an assembly through creative use of coverage plots
Hagfish is a tool that is to be used in data analysis of Next Generation Sequencing (NGS) experiments. Hagfish builds...uires a reference sequence and a paired end re-sequencing data set. Hagfish has more power the l...2934 days ago
RCircos: an R package for Circos 2D track plots
RCircos package provides a simple and flexible way to make Circos 2D track plots with R and could be easily integrated into other R data processing and graphic manipu...resenting large-scale multi-sample genomic research data. It...2935 days ago
MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping
MOSAIK is a stable, sensitive and open-source program for mapping second and third-generation sequencing reads to...SAIK was the only aligner to provide consistent mappings for all the generated data (se...2935 days ago
- gkno opens the world of complex bioinformatic analysis to people of all level of computational expertise. This site contains documentation, tutorials and information on all the tools that comprise gkno. http://gkno.me/how-to/install.html http://gkno.me/software.html
2935 days ago
- Cytoscape is an open source software platform for visualizing complex networks and integrating these with any type of attribute data. A lot of Apps are available for various kinds of problem domains, including bioinformatics, social network analysis, and semantic web.
2932 days ago
