JBrowse: Embeddable genome browser built completely with JavaScript and HTML5
JBrowse is a fast, embeddable genome browser built completely with JavaScript and HTML...base genomes and deep-coverage sequencing. Quickly open and view data files on your com...ions with thousands of tracks. Very light server resourc...2181 days ago
1580 days ago
PureCN: copy number calling and SNV classification using targeted short read sequencing
This package estimates tumor purity, copy number, and loss of heterozygosity (LOH), and classifies single nucleotid...lling and SNV classification using targeted short read sequencing.” Sourc...2140 days ago
NanoPack: visualizing and processing long-read sequencing data
The NanoPack tools are written in Python3 and released under the GNU GPL3.0 License. The source code can be found at https://github.com/wdecoster/nanopack, together with links to separate scri...2138 days ago
Hercules: a profile HMM-based hybrid error correction algorithm for long reads
Choosing whether to use second or third generation sequencing platforms can lead to trade-offs between accuracy and...asepairs of a long read are covered with short reads. Availability: Hercules sourc...2128 days ago
CoLoRMap: Correcting Long Reads by Mapping short reads
Second generation sequencing technologies paved the way to an exceptional increase in the number of sequenced genom...s show that CoLoRMap compares well with existing hybrid correction methods.The sourc...2128 days ago
2127 days ago
LRCstats: a tool for evaluating long reads correction methods
LRCstats is an open-source pipeline for benchmarking DNA long read correction algorithms for long reads outputted by third generation sequencing technology such as mac...2126 days ago
CBS Comparative Microbial Genomics group - BioTools download page
...ized operating system, based on Xubuntu 10.10, available through the open source Ubuntu project. The system ca...ing the user to run the system alongside any other operating system. Source codes for all programs are provided...2126 days ago
2091 days ago