Results for "Assessment"
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...of short RNA expression such as a quality control of the raw reads, processing of the raw reads for the subsequent analysis and initial quality assessment of the library. ChIP Seq...3689 days ago
QUAST: quality assessment tool for genome assemblies
QUAST evaluates genome assemblies. For metagenomes, please see MetaQUAST project.It can works both with and without a given reference genome.The tool accepts mu...2987 days ago
- ...nomes grows by the day, quality assessment of the resulting assembled se...vides measures for quantitative assessment of genome assembly, gene set,...om OrthoDB. BUSCO assessments are implemented in open-sour...ation pipelines. BUSCO assessments offer intuitive metrics, bas...
2954 days ago
- ...ovoulos, Michael Clarke, Mark Blaxter(submitted 2013-10-01 to Frontiers in Bioinformatics and Computational Biology special issue : Quality assessment and control of high-throughpu...
2919 days ago
- ...is critical for subsequent analysis. Visualization and quality assessment of de novo genome assemblies...Keller, Falquet, Xenarios & Wurm (2011) Visualization and quality assessment of de novo genome assemblies....
2848 days ago
GAGE : Genome Assembly Gold-standard Evaluation
...an evaluation of the very latest large-scale genome assembly algorithms. We have organized this "bake-off" as an attempt to produce a realistic assessment of genome assembly software i...2834 days ago
eQuant : energy-based quality assessment of protein
...tain serious errors, which limit the usefulness and reliability of these particular protein structures.eQuant is a service for structure quality assessment of single proteins, which uti...2543 days ago
IONiseR: tools for the quality assessment of data produced by Oxford Nanopore’s MinION sequencer
This package is intended to provide tools for the quality assessment of data produced by Oxford Nanopore’s MinION sequencer. It includes a functions to generate a number plots for...2391 days ago
- ...es of genome completeness and contamination by using collocated sets of genes that are ubiquitous and single-copy within a phylogenetic lineage. Assessment of genome quality can also be...
2211 days ago
Merqury: reference-free quality and phasing assessment for genome assemblies
Often, genome assembly projects have illumina whole genome sequencing reads available for the assembled individual. The k-mer spectrum of this read set can be used for in...1466 days ago
