Results for "strain"
Bookmarks
CoronaVIR: Computational Resources on Novel Coronavirus (SARS-CoV-2 or COVID-19)
...V-2. Here, We have collected and organized information related to novel strain of coronavirus, i.e. SARS-CoV...c and therapeutic knowledge about coronaviruses particularly the recent strain, i.e. SARS-CoV-2 or 2019-nCoV...1141 days ago
- ...tecting HGT between closely related species or strains is challenging, as the phylo...in detecting HGT between congeneric species or strains, especially in clinical micr...y candidate HGT events between closely related strains. The method confirms candida...
2911 days ago
Genome Annotation Transfer Utility (GATU)
...dy been annotated. For example, whenever a new strain of SARS coronavirus is sequen...using GATU, to automatically annotate the new strain using a previously-annotated...genes from the reference genome (the annotated strain) to the new sequence (the una...2570 days ago
- ...---------------------------------------------------------------------- tax_id: the unique identifier provided by NCBI Taxonomy for the species or strain/isolate GeneID: the unique i...
1978 days ago
mixtureS: a novel tool for bacterial strain reconstruction from reads
mixtureS that can de novo identify bacterial strains from shotgun reads of a clon...omic sample, without prior knowledge about the strains and their variations. Tested...tal datasets, mixtureS reliably identified the strains, their numbers and their abu...1390 days ago
Genome assembly training tutorial at Galaxy !
In this tutorial we assemble and annotate the genome of E. coli strain C-1. This strain is routinely used in experimenta...Bull 1997, Bull 1998, Wichman 1999) have been performed using this strain and bacteriophage phiX174.1262 days ago
QuasiModo - Quasispecies Metric Determination on Omics
...benchmarking study. In this study we evaluated genome assemblers and variant callers on 10 in vitro generated, mixed strain HCMV sequence samples, each consisting of two lab strains in different abundance ratio...1080 days ago
