How to install Perl modules manually, using CPAN command, and other quick ways
...L, remember the case sensitivity, make and make test.# perl Makefile.PLChecking if...patWriting Makefile for XML::Parser# make# make testInstall the perl module:Now yo...30 kB 00:00(2/5): perl-Test-Harness-2.64-31.fc9.i386.rpm&...3994 days ago
3983 days ago
Swabs to Genomes: A Comprehensive Workflow
...ics can pose a significant barrier to entry for many who may be interested in microbial genomics. The objective of the present study was to design, test, troubleshoot, and publish a...3600 days ago
PEAR: a fast and accurate Illumina Paired-End reAd mergeR
...R evaluates all possible paired-end read overlaps and without requiring the target fragment size as input. In addition, it implements a statistical test for minimizing false-positive...2994 days ago
Master Thesis: Trans-membrane topology prediction through Markov based decoders
...s into a bundle. This requires the correct assignment of the buried and lipid-exposed faces of the TM domains. Results: In a cross validated test on single sequences, our tran...3988 days ago
Applied Statistics for Bioinformatics using R
...ction into statistics in order to solve some problems of bioinformatics. Statistics provides procedures to explore and visualize data as well as to test biological hypotheses. The bo...2119 days ago
Bio++ : C Language libraries for your biological need
...Some of the new feature has been added in the latest version, these are as follows...core computation.Sequence bootstrap.Homogeneity test (Bowker's test).etc. Phyloge...file paths, getting file extensions and names, testing existence, open and store...3991 days ago
A guide for complete R beginners :- R Syntax
...p page for the FUNCTION ‘read.table’ help.search(“t test”) Searches for help pages that might relate to the phrase ‘t test’ NOTE: quotes are need...3401 days ago
3964 days ago
Most Commonly used Awk by Bioinformatician
...olumn 2: awk '{x+=$2}END{print x/NR}' input.txt regex (egrep): awk '/^test[0-9]+/' input.txt calculate...'{print $1,$2}' substitution (sed is simpler in this case): awk '{sub(/test/, "no", $0);print}' input.txt...3956 days ago
3942 days ago
RNA-Seq Data Pathway and Gene-set Analysis Workflows
...eq Data Pathway and Gene-set Analysis Workflows“. First cover a full workflow from preparation, reads counting, data preprocessing, gene set test, to pathway visualization in...3877 days ago
CPCRI Kasaragod Bioinformatics PA
...671 124, KERALA WALK-IN-INTERVIEW Walk-in-test cum interview for selection t...II shall apply online and walk-in for a written test and interview at CPCRI, Kasar...l certificate will not be allowed to attend the test / interview. Those who are qu...3936 days ago
Research Associate @ INDIAN INSTITUTE OF SPICES RESEARCH
...hikode – 673 012, Kerala Phone No. 0495 2731 410 WALK -IN- TEST CUM INTERVIEW Walk- in- Test cum Interview (based on test)...secure the minimum marks prescribed by the Institute in written test only will be eligible for ca...3814 days ago
3929 days ago
If your genes revealed you would get a disease, would you want to know?
...of diseases such as Parkinson's, cancer, Alzheimer's. We asked people in San Francisco's Union Square for their take on this question: If a genetic test revealed you were at high ris...3883 days ago
The New York Genome Center and IBM Watson Group Announce Collaboration to Advance Genomic Medicine
...(NYGC) and IBM announced an initiative to accelerate a new era of genomic medicine with the use of IBM's Watson cognitive system. IBM and NYGC will test a unique Watson prototype des...3743 days ago
2188 days ago
Install ATOM editor on Elemantory OS / Ubuntu
...list, ln, lns, login, ls, open, outdated, prune, publish, rebuild, rebuild-module-cache, remove, rm, search, show, star, starred, stars, test, uninstall, unlink, unpu...1219 days ago
Tryst with a Bioinformatician # Dr Altan Kara
...nois University Edwardsville, School of Pharmacy. What was your greatest scientific disappointment in...ld not blindly trust the output of a tool/software but do a benchmarking test for each of the tools which t...2406 days ago
Public Databases for Bioinformatics !
https://www.nature.com/articles/s41467-020-17155-yServer Infrastructure: File Server: dhara: Synology 3614 Storage Appliance 4 Core Xeon 108TB disk storage 10Gb ethernet to SCG3 Access atx: dhara:5000 Has btsync server (try it - its much better than dropbox) Compute Servers: nand...Tags: public, database, test, genome, human
1183 days ago
mutatrix: a population genome simulator which generates simulated genomes.
genome simulation across a population with zeta-distributed allele frequency, snps, insertions, deletions, and multi-nucleotide polymorphisms More at https://github.com/ekg/mutatrix ./mutatrix -S sample -P test/ -p 2 -n 10 reference.fastaTags: mutatrix, population, genome, simulator, generates, simulated, genomes, ngs, test
1603 days ago
Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
Check the perl module Test if dependencies are met by running this perl one-liner: perl -e "use JSON::XS;"1278 days ago
Comment on "Setting up autoConTAMPR !"
...ar-quiet-perl libterm-readkey-perl libtest-exception-perl libtest-mockobject-perl libtest-warn-....Selecting previously unselected package libtest-exception-perl.Preparing to u...ar.gz /usr/bin/make -- OKRunning make testPERL_DL_NONLAZY=1 "/usr/bin/pe...1486 days ago