List of bioinformatics workflow management tools !
Here are list of Workflow Managers BigDataScript – A cross-system scripting language for worki...Python that aims to reduce the complexity of creating workflows by providing a fast an...1181 days ago
Tools to detect synteny blocks regions among multiple genomes
The synteny block (which etymologically means “on...), SyMAP (http://www.symapdb.org/) SyMAP (Synteny Mapping and Analysis Program) v4.0 is...uitable image of syntenic relationships or physical mapping can be obtained. http://www.a...2648 days ago
Next Generation Sequencing (NGS) Tutorials
Institute of computational biomedicine, Cornell University provide an NGS workshop...OI: 10.1093/bioinformatics/btr441 ngs_backbone: a pipeline for read cleaning, mapping and SNP calling using Next Ge...3526 days ago
Latest paper on comparison of mapping tools
...V. Catalyurek "Benchmarking short sequence mapping tools" BMC Bioinformatics,...rdjournals.org/content/28/24/3169 Some new Mapping tool links: GSNAP http:/...map/ RMAP http://rulai.cshl.edu/rmap/ mrsFAST http://mrsfast.sourceforge.net/Home http://sou...3935 days ago
Bioinformatics approach to Boar Taint
Meat products obtained from intact male pigs often produce offensive smell...ng SNPs haplotypes in close linkage disequilibrium with QTLs and fine mapping of QTLs through association mapping of genotyped SNPs. &nb...3828 days ago
1653 days ago
Bio++ : C Language libraries for your biological need
...implementations. Support for alignments.Various I/O formats supported: Fasta, Mase, CLustal, Phylip, DCSE...ral states reconstructions: Marginal likelihood.(Weighted) substitution mapping.Sequences simulation under an...3986 days ago
Genome Assembly Tools and Software - PART2 !!
...nd high-coverage genomes from fastq files in a short time and produ...e-assembled contig sequences (FASTA) and NGS paired-read data (FAST...IMAGE 2.4.1 – Iterative Mapping and Assembly for Gap Eliminat...ms into contigs. It is a very fast and accurate DNA sequence assemb...2724 days ago
3986 days ago
3980 days ago
3928 days ago
3927 days ago
Ph.D. Fellowship (Computational Biology/Bioinformatics) : Cork, Ireland : Cork, Ireland
Ph.D. Fellowship (18,000 euro/pa, plus tuition fees at the EU students rate) is ava...some profiling data. Ribosome profiling (ribo-seq) is a technology that allows mapping positions of the ribosomes on...3954 days ago
National Training on Bioinformatics Computational Tools for Microbial Research Nov 19 to 30, 2013
Agricultural research in modern scientific arena is being represented by proper integr...re complexities of biology in nature. In the era of fast accumulating biological data...ientists/researchers in this most emerging area and fast de...3911 days ago
3986 days ago
3852 days ago
The Best Bioinformatics / Computational Biology Quotes
Bioinformatician are not anti-social; We are just genome friendly. Bioinformatician would love to change the b...lete it ! Bad or missing mouse genome. Spank the cat? (Y/N) Genome make very fast, v...3759 days ago
3911 days ago
Dr. Ken Buetow: IS & Personalized Medicine Lecture-Part 1
...rehensive molecular characterization. Nowhere is this change happening faster than in the field of cancer...udies developing and applying linkage disequilibrium methods as genetic mapping tools. The laboratory also d...3909 days ago
2731 days ago
Create genome scaffolding with Perl
#!/usr/bin/perl use warnings; use strict; use English; use Pod::Usage; ## uses pod documentation in usage code use Getopt::Long qw(:config auto_version auto_he...2347 days ago
Comment on "LAMSA: fast split read alignment with long approximate matches"
...ery. [300] -k --bwt-kmer [INT] Length of BWT-seed. [19] -f --fastest Use GEM-mapper's fastest mode(--fast-mapping=0). [false] Scoring optio...ing for supplementary alignment. [false] -C --comment Append FASTQ comment to SAM output. [false]...2161 days ago