Results for "refine"
Blogs
Tools to detect synteny blocks regions among multiple genomes
...tory elements and novel structural features of study species by comparing to a well annotated reference sequence, thus enabling genome curators to refine and edit annotations of speci...2662 days ago
Bookmarks
- ...s from sequence data. RepeatModeler assists in automating the runs of RECON and RepeatScout given a genomic database and uses the output to build, refine and classify consensus models...
2868 days ago
Mulan: MUltiple sequence Local AligNment and conservation visualization tool
...that ensures a recapitulation of evolutionary sequence rearrangements (such as inversions and reshuffling) in any of the species. It combines refine and tba tools...2533 days ago
- +2 more Bookmarks
Files
- ...orarySamsamtools sort: can't open "temporarySam": No such file or directory[bwa_aln_core] convert to sequence coordinate... 1.00 sec[bwa_aln_core] refine gapped alignments... 6.07 sec...
2203 days ago
Top-level pages
Commercial and public next-gen-seq (NGS) software
...ns for Next Generation Sequencing data analysis. JMP Genomics - Next gen visualization and statistics tool from SAS. They are working with NCGR to refine this tool and produce others....3570 days ago
Software packages for next gen sequence analysis
...for Next Generation Sequencing data analysis. * JMP Genomics - Next gen visualization and statistics tool from SAS. They are working with NCGR to refine this tool and produce others....3294 days ago
News
- ...genomes without having to write scripts. For example, you can run a search in Assembly and use check boxes (see left side of screenshot below) to refine the set of genome assemblies...
2599 days ago
Bio-Scripts
Perl script to run SATSUMA in loop !
#!/usr/bin/perl -w use strict; use File::Temp qw(tempfile); # Usage perl 1by1.pl for SATSUMA analysis # User need to set the reference multifasta file name here...2192 days ago
- ...ariants -------------------------------------------------------------------------------------- Variant Evaluation and Refinement: Tools that evaluate and refine variant calls, e.g. with anno...
2127 days ago
