Comment on "Long read assembly workshop !"
Bacterial genome assembly tutorial http://evomics.org/learning/assembly-and-alignment/2017-assembly-lab/2102 days ago
Comment on "Long read assembly workshop !"
Long reads assembly PPT https://www.msi.umn.edu/sites/default/files/Badalamenti_PacBio_tutorial_12-10-2014.pdf2102 days ago
Comment on "Long read assembly workshop !"
Long reads assembler https://zenodo.org/record/345098/files/scientific_reports_assembly_long_reads%282%29.pdf2102 days ago
Comment on "Want to Know which genome assembler rule the world ?"
Genome assembly tools at https://bioinformaticsonline.com/search?q=assembly&entity_type=object&entity_subtype=bookmarks&offset=0&search_type=entities2127 days ago
Comment on "Indexcov: fast coverage quality control for whole-genome sequencing"
...zip_assembly bioconda install goleftzsh: command not found: bioconda➜ falconUnzip_assembly conda install goleft Solving environment: done ## Package Plan ## environment location: /home/urbe/anaconda...2138 days ago
Comment on "HALC: High throughput algorithm for long read error correction"
Inputs Long reads in FASTA format. Contigs assembled from the corresponding short reads in...;>short_reads.fa). Using AlignGraph runHALC.py long_reads.fa contigs.fa [-options|-options]...2154 days ago
2161 days ago
Comment on "Nanopolis: polish a genome assembly"
...aft.fa # Align the basecalled reads to the draft sequence bwa mem -x ont2d -t 8 draft.fa reads.fa | sa...ft.fa | parallel --results nanopolish.results -P 8 \ nanopolish variants --consensus -o polished.{1}....2162 days ago
Comment on "Installing Porechop on Ubuntu !"
➜ MyPassport porechop -i /media/urbe/MyDDrive/ONTdata/allONT/allONT.fasta -t 40 > ONT_c...rrected.fa Loading reads/media/urbe/MyDDrive/ONTdata/allONT/allONT.fasta1,634,...end (6,338,306 bp removed) Splitting reads containing middle adapters1,634,47...2168 days ago
Comment on "List of Bioinformatics Vacancy, Jobs, Opportunity websites"
Bioinformatics jobs at https://www.monster.com/jobs/search/?q=Bioinformatics&intcid=skr_navigation_nhpso_searchMain&jobid=1985086042168 days ago