Software for genome assembly !
...tps://github.com/PacificBiosciences/ GenomicConsensus 8 PILON error correction https://github.com/broadinstitute/pilon/wiki 9 BUSCO single copy gene markers http://busco.ezlab.org/ 10 Bandage graph...1371 days ago
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Genome Assembly Tools and Software - PART1 !!
...heterogeneity and a novel length-dependent model of gap formation. BUSCO v1.1b1 – Assessing Genome Assembly and Annotation Completeness with Single-copy Orthologs BUSCO completeness assessment emplo...2713 days ago
Installing Busco version 4.0.6
...install -c bioconda -c conda-forge busco=4.0.6 Collecting package met...added / updated specs: - busco=4.0.6 The following pack...1 131.2 MB bioconda busco-4.0.6 |...oconda/linux-64::blast-2.2.31-1 busco bioconda/noarch:...1480 days ago
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Comment on "Short-read assembly using Spades !"
...of assembly: After running SPAdes, the next step is to evaluate the quality of the assembled genome. This can be done using tools such as QUAST or BUSCO. These tools assess the compl...443 days ago
2959 days ago