Tags: useR! Conference, R
4004 days ago
Tags: R, Try R, Learn R, R Tutorial
3998 days ago
R package for visualising GO enrichment
An R package that visualizes the GO enrichment results as word clouds and arranges them together with figures of experimental data. This allows us to draw informative summary plots for analyses such as differential expression or clustering, where for each gene list we display its behaviour in the...Tags: R, GO, Gene Enrichments, Clustering, GO annotation, CRAN
3992 days ago
Tags: R, Webinar, GWAS
3941 days ago
RNA-Seq Data Pathway and Gene-set Analysis Workflows
It describe the GAGE (Luo et al., 2009) /Pahview (Luo and Brouwer, 2013) workflows on RNA-Seq data pathway analysis and gene-set analysis. The gage package (2.12.0) now includes a new tutorial, “RNA-Seq Data Pathway and Gene-set Analysis Workflows“. First cover a full workf...Tags: R, Bioconductor, RNA-seq, GAGE, Pathway
3885 days ago
Tags: R, Version, New, Upgrade, R 3.0.3
3761 days ago
Tags: Bioinformatics, R, Language
3604 days ago
Surrogate Variable Analysis (SVA)
The sva package contains functions for removing batch effects and other unwanted variation in high-throughput experiment. Specifically, the sva package contains functions for the identifying and building surrogate variables for high-dimensional data sets. Surrogate variables are covariates constr...Tags: RNA-seq, Genomics, R, Bioconductor
3527 days ago
Tags: Bioinformatics, Computational Biology, R, dcGOR, Tool, Protein, Package
3518 days ago
Tags: Computational Biology, R, SPSS, Translate, Migrate, Code
3505 days ago