Results for "Palindromes"
Blogs
Steps to find palindrome in genomes !
Palindromes are sequences of nucleotides tha...are some methods for discovering palindromes in genomes: Direct seque...of the simplest ways to discover palindromes is to search the genome seque...ach can help identify functional palindromes that are under selective pres...451 days ago
Bookmarks
Pacasus: Correction of palindromes in long reads from PacBio and Nanopore
Tool for detecting and cleaning PacBio / Nanopore long reads after whole genome amplification. Check the poster from the Revolutionizing Next-Generation Sequencing (2nd e...2028 days ago
Top-level pages
Tools for Searching Repeats And Palindromic Sequences
...e was I ere I saw elba")—with genetic palindromes it does not matter whether th...ime) end of the strand. Recent research on palindromes centers on understanding pali...' that, when reversed, still reads CGAAGC. Palindromes are important sequences withi...2239 days ago
Wire posts
Bio-Scripts
Raku script to find palindrome in genomes !
.../; # remove any spaces return $str eq $str.flip; } sub find-palindromes(Str $dna, Int $min-length, In...le usage my $dna = "GGATCCATGGCCTAGG"; # example DNA sequence find-palindromes($dna, 3, 8); # find palindrom...452 days ago
Comments
Comment on "Tools for Searching Repeats And Palindromic Sequences"
Check out this GAP-Seq: a method for identification of DNA palindromes https://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2164-15-3941562 days ago
Comment on "Tools for Searching Repeats And Palindromic Sequences"
I wrote a tools "Palindromer" to find palindromes in whole genome sequences. You can try https://github.com/jnarayan81/Palindromer . I am happy to improve it, if any features are requested.2040 days ago
