Software and Tools to detect structure variation with long reads !!
...er using third generation sequencing Sniffles is a structural variation caller using third generation sequencing (PacBio or Oxford Nanopore). It detects all types of SVs using eviden...2636 days ago
2558 days ago
Software developed in pevsner lab
...of SNP Data pediSNP: Analyze SNP Data From a Pedigree of Two Generations kcoeff: Calculate Cotterman Coefficients of SNP Genotype Data triPOD: Detects chromosomal abnormalities in...3527 days ago
2690 days ago
List of In-silico Binding Site Prediction Tools
...ructural conservation. Results: An algorithm, ProBiS is described that detects structurally similar sites on...he query protein to members of a database of protein 3D structures and detects with sub-residue precision, s...3772 days ago
Commercial and public next-gen-seq (NGS) software
...e-bio.sourceforge.net/) designed for fast mapping of Illumina reads SNP/Indel Discovery ssahaSNP - ssahaSNP is a polymorphism detection tool. It detects homozygous SNPs and indels by...3547 days ago
3574 days ago
Cleaner BLAST Databases for More Accurate Results
...t nucleotide (nt) and protein (nr) BLAST databases. Foreign Contamination Screen tool for genome cross-species screening (FCS-GX) detects contamination from foreign or...40 days ago
3021 days ago