3978 days ago
3952 days ago
Linux Sort Commands for Bioinformatics
Almost all the scripting languages such as Perl, Python etc have built-in sort, but unfortunately none of them are as flexible as sort command. But one when it come to space e...3657 days ago
3300 days ago
Frequent words problem solution by Perl
Solved with perl http://rosalind.info/problems/1a/ #Find the most frequent k-mers in a string.#Given: A DNA string Text and an integer k.#Return: All most frequent k...3283 days ago
Reverse Complement Problem Solved with Perl
Question at http://rosalind.info/problems/1b/ #Find the reverse complement of a DNA string.#Given: A DNA string Pattern.#Return: Pattern, the reverse complement of Pat...3283 days ago
Pattern Matching Problem Solution with Perl
Problem at http://rosalind.info/problems/1c/ #Find all occurrences of a pattern in a string.#Given: Strings Pattern and Genome.#Return: All starting positions in Genom...3283 days ago
Clump Finding Problem Solved with Perl
The question at http://rosalind.info/problems/1d/ Script are moved to http://bioinformaticsonline.com/snippets/view/34633/clump-finding-problem-solved-with-perl2364 days ago
Genome Assembly Tools and Software - PART2 !!
...to process RNA-Seq data. It is composed of two modules: assemblySAM and SAMMate....rently we offer this as a command-line tool in Perl. The input data is given by p...metersVelvetOptimiser is a multi-threaded Perl script for automatically optimis...2716 days ago
Awesome perl frameworks, libraries and software - PART 2
...o/p5-Net-DNS-Lite - pure-perl DNS resolver with support for timeout japhb/perl6-bench - Benchmark and c...ber-lc - Perl and Python modules for normalizing Library of Co...at will be able to read/write perl storable cosimo/perl5-net-stats...2525 days ago