3960 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...s, real-time collaboration They have a couple modules to do so, and have enabled p...zygous SNPs and Indels; software composed of 2 modules (kissnp2 and kissreads) Inp...ection for low-depth targeted NGS data; python module or command- line program; In...2927 days ago
Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
...symbols as a input. GeneSCF supports more organisms from V1.1. Examples to download database as simple text file using GeneSCF "prepare_database" module, 1) https://www.biostars.org/...2890 days ago
Genome Assembly Tools and Software - PART1 !!
...Physical Maps The purpose of this Python module is help scientists use optica...a. Trinity combines three independent software modules: Inchworm, Chrysalis, and Bu...ndash; De Novo Assembler EPGA2 updates some modules in EPGA which can improve me...2704 days ago
Awesome perl frameworks, libraries and software - PART 1
...l collection is a set of Perl modules which provides a simple and...excel-writer-xlsx - Perl module to create Excel XLSX files..../pam_script - PAM script module will allow you to execute scr...p;- Perl's WWW::Facebook::API Module vti/sockjs-perl - SockJ...2507 days ago
Edit distance application in bioinformatics !
...$STR1, $STR2 ); # ref to array of strings There are many different modules on CPAN for calculating the...algorithm that require a C compiler, but will be a lot faster than this module. The Damerau-Levenshtein edi...2359 days ago
Bioinformatics Web Application Development with Perl
...ve of web development may have made the CGI.pm module central, modern Perl web prog...age Mechanisms Perl's venerable DBI module has been the focal point of d...e older but still viable mod_perl Apache httpd module embeds Perl into the web serv...2340 days ago
PerlOneLiner for Bioinformatician
...;|g # Extract all matches from a regular expressionmy @matches = $text =~ /regex/g; PERL TRICKS----------- # Print the version of a Perl moduleperl -MModule -le 'print $Module::VERSION'p...2320 days ago
Python learning resources for bioinformatics and computational biologist !
...bsp;(Just fill the fields with any values) Python in Hydrology - Sat Kumar Tomer Python Koans (2.7 or 3.x) Python Module of the Week (3.x) Python Module of the Week (2.x) P...2273 days ago
Installing Bio::SCF perl module
Most Perl modules are written in Perl, some use XS&nbs...to find out how to get the right compiler. Modules may have dependencies on other modules (almost always on CPAN)...line.com/blog/view/710/how-to-install-perl-modules-manually-using-cpan-command-...2236 days ago