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Bioinformatics and Sequencing Courses and Workshops
Swiss Institute of Bioinformatics (SIB) organises lots of bioinformatics courses cover...nbsp;also organise bioinformatics and sequencing courses annually: http://www.embl.de/training/events/index.php?...3966 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics...contigs and snps. Align/Assemble to a reference BFAST - Blat-...ce/Unix. MAQ - Mapping and Assembly with Qualities (renamed from....php/BFAST De novo Align/Assemble ABySS - Assembly By Short Se...ome (without any ab initio assembly of the reads), and all the p...3578 days ago
Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad This is an iOS app that allows...enatlas, Wikipedia, HUGO, and OMIM. GeneRIF gene interactions ca...isease associations from PMD, OMIM an...n interfaces with Simbiot, Ensembl, NCBI, Gene Ontology, KEGG Pa...ence information for NCBI, Ensembl, RefSeq and UniProt. SimGene...3600 days ago
Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomic..." into mini-contigs before assembly. Includes SNP detection, CHi...C Slater and Ewan Birney from EMBL. C for POSIX. * GenomeMapper...Italy. Win/Linux. * RMAP - Assembles 20 - 64 bp Illumina reads t...Mimicking Intelligent Read Assembly) is able to perform true hyb...3301 days ago
Comprehensive list of visualization tools for biological pathways
The study of biological pathways is a key to understand the different processes inside...the visualization, analysis and customization of pathway maps http://pathways.embl.de/ Kegg-Based Viewer ...2346 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...ioSciences” De novo assembly: “In addition to Sanger s...base” based on COSMIC, OMIM, and TCGA databases Laserge...NGS software pipeline for assembly, alignment, variant calling and...; performs localized micro-assembly of specific regions of inter...2968 days ago
Tools for Searching Repeats And Palindromic Sequences
What are genomic interspersed repeats? In the mid 1960's scientists discovered that m...t to look at tools using Repbase for example: CENSOR CENSOR@GIRI CENSOR@EMBL-EBI RepeatMasker MUMmer...2270 days ago
List of visualization tools for network biology
Network analysis is any structured technique used to mathematically analyze a cir...lore known and predicted interactions of chemicals and proteins http://stitch.embl.de/ STRING Protein interact...2347 days ago