Tools for bacterial whole genome annotation
...ab initio gene prediction algorithms with homology based methods. The first version of NCBI Prokaryotic Genome Automatic Annotation Pipeline (PGAAP; see Pubmed Article) de...2375 days ago
PerlOneLiner for Bioinformatician
...the strings from "a" to "zz"perl -le 'print ("a".."zz")'perl -le 'print "aa".."zz"' # Create a hex looku...f ($p) { print; $p = 0 } $p++ if /regex/' # Print lines that match regex AAA and regex BBB in any orderpe...2345 days ago
List of visualization tools for network biology
...other data http://www.biologicalnetworks.org BioMiner Modeling, analyzing and visualizing biochemical pathways and networks http://www.zbi.uni-saarland.de/chair/projects/BioMin...2331 days ago
2288 days ago
Some useful Bioinformatics links
...epdf?author_access_token=dktG7e98wyRJnaEEMTcPqtRgN0jAjWel9jnR3ZoTv0P7E7t-wVGo30iojNO7dICajNY_7PE5xVPv6OoLe7hn9TeUjcZ5umREOzNoPMWkfYH58RS6uxm3vm4e4BG2AA_WKW84i6egKK271NwMq-NfzA%3D%3D...2285 days ago
LINKS scaffolder bloomfilter setting !
...AT UNDER -s ! Paired MPET reads in their original outward orientation <- -> must be separated by ":" >template_name ACGACACTATGCATAAGCAGACGAGCAGCGACGCAGCACG:ATATA...2194 days ago
Tools for Geospatial data analysis !
....in/dTdQsmKX Descartes - https://lnkd.in/dCJykxwW Fiona - https://lnkd.in/d8sJ3Q5a Folium - https://lnkd.in/dfSsE-MB GDAL - https://lnkd.in/dYBJBaAY Geohash - https://lnkd.in/d...453 days ago