Using Interval Trees to Query Genome Annotations by Position
To work on query related to overlapping genomic features: use IntervalTree python pkg http://informatics.malariagen.net/2011/07/07/using-interval-trees-to-query-genome-ann...3564 days ago
Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad This is an iOS app that allows for the opening and analysis of DNA sequencing files - ab1. It includes handy tools such as "Reverse Compl...e opening and analysis of DNA sequencing...p/geneindex/id319769866?mt=8 Genome Voyager: iPad Gain first hand ex...3557 days ago
List of Biotechnology Research Laboratory, University, and Centre in India
DEPARTMENT OF BIOTECHNOLOGY Centre For DNA Fingerprinting And Diagnostics (CDFD), Hyderabad...icals Corporation Limited, Bulandshahar Indian Vaccines Corpor...oratory Animal Science Food and Drug Toxicology Research Cent...(W. B.) · Central Inland Capture Fisheries Research Insti...2586 days ago
A guide for complete R beginners !
This tutorial is intended to introduce users quickly to the bas...ad a table, plot some graphs, and perform some basic statistics...found on the project website and via bioconductor (not covered...ration (Optional) Download and save the tutorial data set from h...3377 days ago
Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomics Workbench - de novo and reference assembly of Sanger,...obtained from next-generation sequencing machines (specifically th...s, emerged by next-generation sequencing technology, back to the refer...ap layout paradigm. By D. Hernandez, P. François, L. Farinelli,...3258 days ago
Comprehensive list of visualization tools for biological pathways
The study of biological pathways is a key to understand the different processes insid...upporting hiding of cofactors and drawing of chemical structure...oto Encyclopedia of Genes and Genomes pathways http://www.genome.jp/kegg/ Omix Visuali...hway diagrams in a visual way and the an...2302 days ago
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List of Bioinformatics Software Tools for Next Generation Sequencing
...ds from these high-throughput sequencing machines are supported: The 454 FLX System and the 45...d text files Supports custom genome builds and annotation databas...Description: family-based sequencing studies- provides probability...CLImAT Description: standalone program; “accurate detect...2924 days ago
Tools for Searching Repeats And Palindromic Sequences
What are genomic interspersed repeats? In the mid 1960's scientists discovered that many genomes contain stretches of high...enome is repetitive in nature and as improvements are made in dete...r whether the nucleic acid strand is read starting from the 3' (th...ences on the complimentary strands read...2226 days ago
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