Results for "Protein Structure Prediction and Drug Design"
Top-level pages
List of Bioinformatics Software Tools for Next Generation Sequencing
...supported: The 454 FLX System and the 454 GS Junior System from Roche,...ws for variant identification and analysis, uses NCI-60 data set for c...frequency, functional impact predictions, evolutionary conservation s...age-- SNP/Indel analysis, CNV prediction and disease discovery, whole...2953 days ago
Genome Assembly Tools and Software - PART1 !!
...ly formatted to specific data structure. Currently, existing data structure for this usage can be predomi...argeting assembly of specific protein-coding genes using a graph structure combining both de Bruijn graphs and protein HMMs. The inclusion of HM...nd sequence assembler that is desi...2730 days ago
Source Code and Pseudo Code !!
An algorithm is a procedure for solving a problem in terms of the actions to be executed and the order in which those acti...ate on the algorithmic detail and not just cite an abstraction....Print out appropriate heading and...Also, using words such as Set and Initialize, when assigning value...2703 days ago
Awesome perl frameworks, libraries and software - PART 1
...red pretty-print of Perl data structures and objects PerlGameD...toreBill - A perl script and tex files to create bills for...t/fluent-logger-perl - A structured logger for Fluentd (Pe...utilities, including sieves Andy.../specs - Perl 6 language design documents trizen/sidef ...2533 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
analog -- A feature that appears similar in two taxa which have origi...here "hair" is the character, and "present" and "absent" are its states. cla...condition of that character, and to have arisen later in the e...hat feature. homology -- Two structures are considered homolog...2506 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
kallisto Transcript abundance quantification from RNA-seq data...nces from reference sequences and RNA-seq data (k-mer based) Software...mapper Minimap Lightweight and fast read mapper and read ove...rence-free SNP identification and estimation of phylogenetic tr...on-negative least squares for pred...2415 days ago
- RNA-sequencing (RNA-seq) has a wide variety of applications, but...alysis, including experimental design, quality control, read ali...gnment, quantification of gene and transcript levels, visualizat...nalysis, gene fusion detection and...a and edgeR Differential gene and transcript expression analysis o...
2395 days ago
Tools for bacterial whole genome annotation
RAST – Web tool (upload contigs), uses the subsystems in the SEED database and provides detailed annotation and pathway analysis. Takes several hour...i-level process that includes prediction of protein-coding genes, as well as...fies repeats, aligns ESTs and prot...2376 days ago
Bioinformatics Web Application Development with Perl
Perl's second wave of adoption came from the growth of the wo...Perl has dozens of frameworks and toolkits designed to make web development..., such as CSS 3, web sockets, and HTTP 2. Where Catalyst embraces...rom full-blown web frameworks and content management systems to AP...2365 days ago
List of visualization tools for network biology
Network analysis is any structured technique used to mathemati...ork as a whole at the species and/or population level. Few tool...Following are the list of standalone applications for network analys...OR Visualizing and analyzing protein-protein interaction networks htt...2332 days ago
