Results for "Huffman Code"
Top-level pages
Learning Python Programming - a bioinformatician perspective !
Python Programming is a general purpose programming la...need to be compiled. Interpreter parses the program code and generates the output. Py...he developers need to cast the type manually. Less code and more use makes it more ac...2211 days ago
Understanding BLASTn output format 6 !
BLASTn output format 6 BLASTn maps DNA against DNA, for example gene sequences against a reference genomeblastn -query genes.ffn -subject genome.fna ...2166 days ago
My commonly used commands in Bioinformatics
FYI, I've found it useful to use MUMmer to extract the specific changes that Racon makes, so I can evaluate them individually: minimap -t 24 assembly.fasta long_reads...2138 days ago
Parallel Processing with Perl !
Here is a small tutorial on how to make best use of multipl...p;push (@childs,$fork); }elseif($fork==0){your code here;exit(0);}else{die &ldquo...creates a child process and takes the variables and code with it to analyze it separat...2108 days ago
- The benchmark module is a great tool to know the time the code takes to run. The output is usu...s us with a way to optimize our code. With the advent of petascale..._time = Benchmark->new; our code…… $second_time...time taken by some part of the code in the program. More sophi...
2108 days ago
- It's been a while since I last instal...s now version 35 and that the code to download was: blatSrc...ecided to download the source code and compile that.I will be co...le that comes with the source code.One thing about building blat...or all architectures.The BLAT code assumes that you are compilin...
2091 days ago
- Follow this: Settings file Error Your web server does not have permission...r-user-id/public_html/elgg/elgg.1.8.0.1/ The directory where you put the Elgg code (Elgg usually guesses this co...
920 days ago
Short-read assembly using Spades !
If we only had Illumina reads, we could also assemble these using the tool Spades. You can try this here, or try it later on your own data. Get data We will use the...853 days ago
- Elgg is an open source social networking engine that allows the creation of social environments such as campus social networks and internal collaborative platforms for...
634 days ago
Steps to find all the repeats in the genome !
To find repeats in a genome from 2 to 9 length using a Pe...ormation you need. There is a Perl tool called "one_code_to_find_them_all.pl" that can...se the provided Perl script: Once you have the "one_code_to_find_them_all.pl" script,...276 days ago
- « Previous
- 1
- 2
- 3
- 4
- Next »
