Useful Publications and Websites for Deep Sequencing Data Analysis
...ome in less than 6 days using 54 Gb of RAM and a 123-processor compute cluster for calculation of an FM-inde...2011. Full Text, Home Page Rainbow: an integrated tool for efficient clustering and assembling RAD-seq rea...3797 days ago
List of In-silico Binding Site Prediction Tools
...anchor residues, but hot regions, defined by clusters of residues, at the interfac...onservation, are available to screen and sort clusters of residues. PocketQuery was...with depth factors followed by a depth based clustering that uses neighbourhood in...3762 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...cing and microarray file format as well as text files Can input GEO SOFT files Partek Flow Installation can be cloud-based or on a local cluster or Linux server Easy to use...2927 days ago
2932 days ago
Awesome perl frameworks, libraries and software - PART 1
...rt/perl-ssh-tools - A more capable DSH / cluster ssh suite skx/dhcp.io -.../pegex-pm - Pegex Parser for Perl ewels/ClusterFlow - A pipelining tool...uage-perl - Perl package for Atom ewels/clusterflow - A pipelining tool...2507 days ago
Computational resources for TE discovery and TE detection
...R_par http://www.eecs.wsu.edu/~ananth/software.htm MAK http://wesslercluster.plantbio.uga.edu/mak06.html...Tandem Repeats Finder http://tandem.bu.edu/trf/trf.html Transposon Cluster Finder http://www.mssm.edu/la...2292 days ago